Prunus mume (Japanese apricot): 103330900
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Entry
103330900 CDS
T03196
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103330900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103330900
03009 Ribosome biogenesis [BR:
pmum03009
]
103330900
Messenger RNA biogenesis [BR:
pmum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
103330900
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
RNases
103330900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
XPG_I_2
Rv2179c-like
DUF6604
Motif
Other DBs
NCBI-GeneID:
103330900
NCBI-ProteinID:
XP_008231733
UniProt:
A0ABM0NYK0
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Position
LG5:complement(4827261..4834894)
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AA seq
252 aa
AA seq
DB search
MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKSSGKKMEKKVNNSDNMLLVKEKES
QQNSEMPLEEYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE
CLDRMGDWCQSHHKASGLTKKVLESTVSEREAEKQVIEFVKRNVGTYTPQLAGNSVYVDF
AFLKKYMPDLANRFSHVIVDVSSVKALCIRWYPRDNKKAPSKENNHRAMDDIRESIRELK
YYKENIFKASKK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctcgcaaatgcattctctgtgctggagcttgacgctgaagacgacgatcaa
gcgcgagaggcctcttctgtttccaaaaacaaagatgacactacaaaatcttcaggcaag
aagatggagaagaaagtcaacaactctgataacatgttgctagtaaaagagaaagagagt
cagcaaaattcagagatgcctctagaagagtacaagttgcccctggtatggattgacttg
gaaatgactggtttaaatgttgaagttgatcggatactagagattgcctgtataattact
gatggaaaattaacgaaatcagtagagggccctgatttggttattcatcaaactaaggag
tgtttagataggatgggagactggtgtcaaagtcatcataaagctagtgggttgacaaaa
aaggtgctcgaaagtacagtcagtgaaagagaagctgaaaagcaggtcatagaatttgta
aagagaaacgtaggaacatatacacctcagttagcaggcaattcagtttatgtggatttt
gcatttttaaagaaatacatgccagatttggctaaccgtttctcccatgtaatagtggat
gttagcagtgttaaagctttatgcattcgctggtatcctagagataataagaaagcccct
tctaaagaaaataatcacagagccatggatgatattagagaaagtatcagggaacttaaa
tactacaaggagaatatattcaaagcatctaaaaaatga
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