Prunus mume (Japanese apricot): 103330933
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Entry
103330933 CDS
T03196
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103330933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103330933
Membrane trafficking [BR:
pmum04131
]
Endosome - Golgi transport
Others
AP-4 complex
103330933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
HEAT
HEAT_2
Cnd1
HEAT_EZ
TOR1L1_N
PDS5
NPHI_C
Motif
Other DBs
NCBI-GeneID:
103330933
NCBI-ProteinID:
XP_008231757
LinkDB
All DBs
Position
LG5:5085959..5094921
Genome browser
AA seq
974 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEERIVLLEIETLKRRLSEPE
IPKRKMKEYIIRLVYVEMLGHDGSFAYIHAVKMTHDDNLLLKRTGYLAVSLFLSDDHDLI
ILIVNTIQKDLKSDNYLVVCAALNAVCKLINDETVPAVLPQVVDLLAHPKEAVRKKAIMA
LHRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITIDVNSYKDLVVSFVSIL
KQVAERRLPKTYDYHQLPAPFIQIRLLKILALLGSGDKQSSEKMYMVVGDIFRKCDSTSN
IGNAVLYECICCVSAIYPNPKLLEQAAQVISRFLKSDSHNLKYMGIDALGRLIKISPEIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMISINDNHYKTYIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNVKVAHNLMKLIAEGFGEDDDSADSQLRS
SAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDESVK
AYAVTAIMKIYAFEISAQRKVDILPECQSLVEELSASHSTDLQQRAYELQAVISLDAPAV
ESIMPSDASCEDIEIDKSLSFLNDYVQQALEKGAQPYIPENERSGMLNISNFSNQDQHEA
LTHGLRFEAYELPKPAVPSRIPPAAVASSTELVPVPEPSYAREIRQPASLPPVSDAGSSE
LKLRLDGVQRKWGRPTYSSPALSISNSSSSSSQKSANGVTQIDSVSTSNSKARDTYESRR
PQVEISPEKQKLASSLFGGSSKTERRPSSANHKVSKANIHASEKPQVPKAAAVHTEVNHE
PAPDLLDLGDSTSSTASTVDPFKQLEGLLDQTEVALTANHGAAGAAKTPDIMGLYADTSL
SGLSSSVGDPLPTNRDELNLASELSNATRNAQSGVTQLNKGPNPKDSLEKDARVRQMGVT
PTSQNPNLFKDLLG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgaagaccatagggcgagagcttgcgatgggttctcaaggcggcttcggc
caatccaaggagttcctggacctcgtcaagtccatcggcgaagctcgatccaaggccgaa
gaagagcgcatcgtcctcctcgagatcgaaaccctaaaacgacgtctctccgagcctgaa
atccccaagcgcaagatgaaggagtacatcatccgccttgtctacgtcgaaatgctcggc
cacgacggctccttcgcctacatccacgccgtcaagatgacccacgacgacaatctcttg
cttaaacgcaccggttacctcgccgtttcgctcttcctcagcgacgatcacgatttgatc
atcttgatcgtcaacaccatccagaaggatctcaagtctgacaattaccttgtcgtttgt
gccgccctcaatgccgtttgcaagctcatcaacgacgagactgtgcctgccgttttgccc
caggtcgtggacctcctggcccatcccaaggaggctgtcaggaagaaggccatcatggcg
cttcaccgcttttatcagaaatcgccatcttctgtttcgcatctggtctccaatttcagg
aagcgcctttgtgataacgatccgggagtcatgggtgccacgctctgcccgttgtttgac
ctcattacaatcgatgtgaattcttataaggatttggtggtcagctttgtcagcattctc
aaacaggtcgccgagcgcaggttgcccaagacctacgattaccatcagttgccggcgccc
tttattcagattagattgttgaagatcttggcattgttggggagtggtgataagcaatcg
agtgagaagatgtatatggtagtcggcgatatttttaggaagtgcgattctaccagtaat
ataggaaatgctgtactttatgagtgtatttgttgcgtttctgccatatatccaaatcct
aagttgttagaacaggctgctcaagtcatctcaagatttttgaagagtgacagtcataat
ttgaaatatatgggcatcgatgcccttggtcgacttataaagattagtccagagatagca
gagcaacaccaactagccgtcattgattgcttagaggacccagatgatactctgaagcga
aaaacatttgaactattgtacaagatgaccaagtcctccaatgtggaagtgattgtggat
cgtatgattgattacatgattagcattaatgataaccattacaaaacatatatagcttct
agatgtgtggagcttgcggagcaatttgcaccaagtaatcaatggtttatccagaccatg
aataaagtctttgaacatgcgggagatttggtaaatgtcaaggtggcacataacttgatg
aagttgattgctgagggatttggagaggatgatgattctgcagatagtcagttgagatca
tctgcggtggagtcatatttgcgtataattggtgagccaaagcttccatctgtatttctt
caggtcatttgttgggttttgggggaatatggaactgctgatggaaaatattctgcttcc
tatatcactgggaaattatgtgatgtggcagaggcgtattcaaatgatgaatccgtcaag
gcttatgcggttacagcaatcatgaaaatatatgcctttgaaatttcagctcagagaaaa
gtggatattctacctgagtgtcaatctttggtggaagaattgtcagcttctcactcaaca
gatctgcagcagcgtgcatatgaattgcaagctgtcattagcttagatgctcctgcagtt
gagagtattatgccatcagatgcaagttgtgaagacattgagattgataaaagcctttca
ttcctcaatgactatgtccagcaagcactagagaaaggtgctcagccctatattcctgag
aatgagcgctctggaatgttaaatatcagcaacttcagtaaccaagatcagcatgaagct
ttaacccatggtcttaggtttgaggcatatgagcttccaaagccagcagtgccatcaaga
attcctccagctgcagttgcatcctcaaccgagcttgttccagttcctgaaccgtcttat
gctagggagatccgccagcctgcatcattgccacctgtgtcagatgcaggatcatcggaa
cttaagttacgactagacggtgttcaaagaaaatggggcaggccaacatattcctcccca
gcattgtcgatctcaaattcctctagttctagttcccagaaatcagcgaatggggtcaca
caaatagatagcgtgagcacttcaaattcaaaagcacgtgatacttatgagtcaaggagg
ccccaggttgaaatttctccagaaaagcagaagcttgccagttcactgtttgggggatca
tcaaaaaccgagaggaggccatcttctgccaaccataaggtgtctaaggcgaatatccat
gcttcggagaagccccaggtaccaaaggcagcagctgtacacactgaagttaatcatgaa
cctgctccagacttgctcgatttgggtgactcaactagtagtactgcttccactgtagat
cctttcaagcagttagaagggcttcttgatcaaactgaagttgcattaactgcaaatcat
ggtgcagctggtgctgctaagacacctgatattatgggattatatgcagatacatctctc
agcgggcttagtagcagtgttggcgaccctttgccgaccaatagggatgagttaaatctt
gcatctgagttatcaaatgctacaagaaatgctcaaagtggggtaacacaattgaataag
ggtcctaaccctaaagattccttggaaaaggatgcacgtgtaaggcagatgggtgtgacc
ccaacaagtcagaatcccaacttgtttaaagatttgcttggctaa
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