Prunus mume (Japanese apricot): 103330955
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Entry
103330955 CDS
T03196
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103330955
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
General mRNP proteins
103330955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103330955
NCBI-ProteinID:
XP_016652287
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All DBs
Position
LG1:13077970..13086953
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AA seq
601 aa
AA seq
DB search
MDFDEYDYLEKTVQENDERDSKKKTKKDGTEKSYRKREVDDDVSVGAEDEDRKSSKRSKG
EYENGRDKDRHHRSGREREREGERDKDRDRDRERERDRDRSSRDKDKDKDKERERERRER
DKEKERSSDREEKERPRRSSDREEKERPHRSSDREEKERPRRSIDREEKERSRRSIDREE
KERSRRSRSRSDRDREREIREREREIELRESRRFKDKKEAVEPEADPERDQRTVFAYQMP
LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQ
PVMVKPSEAEKNLVQSNTSGGAVGVAGPYGAVDRKLYVGNLHFNMTETHLREIFEPFGPV
ELVQLPLDLETGQCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGSQETG
AKSADFDDDDGGGLSLNAQSRALLMQKLDRTGIATSIAGSLGVPVLNGSAPNQRAGTLPI
NGQAAVSAPILPATVMPFAVTEPIGNPSECLLLKNMFDPATEREPDFDIDIKDDVEEECS
KCGRVKHIYVDKNTAGFVYLRFETVEAAAAAQQSMHLRWFAGRQISALFMQPQVYEARFG
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattatctggagaagactgtacaggagaacgacgagcgggac
tcgaagaagaaaacgaagaaggacggaaccgagaagagttacagaaaaagagaggttgac
gacgacgtttcggtcggtgccgaagatgaggataggaagagcagtaagaggtcgaagggc
gagtacgagaatggccgcgataaggataggcaccacagaagtggtagagagagggagaga
gagggcgaaagggacaaggaccgagatcgtgatcgcgagcgggaaagagacagagacagg
agtagtagagacaaggacaaggacaaggacaaggagagagaaagagagaggagggagaga
gataaggagaaagagagaagtagtgaccgtgaagagaaagagaggcctcgcagaagtagt
gaccgcgaagagaaagaaaggcctcacagaagtagcgaccgcgaagagaaagagaggcct
cgcagaagtatcgaccgcgaagagaaggagaggtctcgcagaagtatcgaccgcgaagag
aaggagaggtctcgcagaagtaggagccgctctgatcgtgatagggagagggaaattaga
gaaagggaacgagaaattgagttgagagagagcaggaggtttaaagacaaaaaagaagcg
gtggagcctgaagctgatccagaaagggatcagagaactgtttttgcttaccagatgcca
ctgaaggcaaccgagagagatgtttatgaatttttctcaaaagcgggcaaggtgagggat
gtacgactgatcatggacaggaattctagacggtcaaaaggagttgggtatattgagttt
tatgatgcaatgtctgtgccaatggctatagctctctctggccaactacttctgggacaa
cctgtaatggtaaaaccttcagaggctgaaaagaatcttgttcagtccaacacatctggt
ggggccgtaggtgttgcaggaccatatggtgcagttgataggaaactgtatgtagggaac
ttacattttaacatgactgagactcaccttagagagatttttgaaccatttggtccagtg
gaactcgtgcaacttccccttgatcttgagacaggacagtgcaaggggtttggctttgtt
caatttgctcatctagaacatgcaaaggcagctcaaagtttgaatggaaagttggagatt
gctggtcgaaccatcaaggtttcatctgttacggatcatgttggatcacaagagactgga
gcaaaatctgcagactttgatgatgatgatgggggtggtttgtctttaaatgcccaatcg
agagcattgctaatgcagaagctggatcgcactggtattgccacaagtattgcggggtct
cttggagttccagtgctgaatgggtcagcaccaaatcaacgagctggtactttgccgatc
aatggccaagcggcagtctctgctccaattcttccggctacagttatgccgtttgcagtc
accgaacccattggaaaccccagtgaatgtctactattaaagaatatgtttgatccagcc
actgagagggagccagattttgatatagacattaaagatgatgttgaagaagaatgctcg
aaatgtggccgggtgaagcatatatacgtggacaaaaacactgctggttttgtgtatttg
cggtttgaaactgtggaagcagcagctgcagcgcaacaatctatgcatttgagatggttt
gcaggcaggcagatttcagccctgttcatgcaaccgcaagtgtacgaggccaggtttgga
gcgtag
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