Prunus mume (Japanese apricot): 103331071
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Entry
103331071 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103331071 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103331071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103331071
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103331071
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103331071
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103331071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
103331071
NCBI-ProteinID:
XP_008231908
LinkDB
All DBs
Position
LG5:7362168..7368427
Genome browser
AA seq
608 aa
AA seq
DB search
MLPHYNSFPHNSNQVHVNGSSAPSHQIQPQLGIKNNQVPIPFSNANAHLSNGHGGAMPNM
PPSMIAQPNFMGVPNNLHPMQSNHLGMPQFGSVGPTSQPGQPHVGFFSSQNNAHSMNSVA
SFPLHGQFCNLVQNVNQAVSSQPPGQLLGHNLLKLPQQINQNMGLPYGQFCLPNPLQNMN
QFVQMQMHNPSQLGPNYAFAGLNQAPQATVSQNSPFFATHQFGNVHSNQAGQQVNQNQQN
LVLPAMQGTQAGQQVNQNQQNSVLPAKQGTQFFQGNHTNTGGVYSSNTNWKHSPSKSFTK
HPKRGVQPQGGFQNSQFHHMKNAKGKFAFPNGNKGKGLINESKGKFTNQGGEGKRSLSLP
YTEQEIQRWREERRRHYPSKSNIEKKLSEKLINSEVIEREAKMRREQLKEILTKQAELGV
EVAEIPSYYLEDSNQGHRREDNKSFTKKGRLPNNFGKREKYDKKDRFAKRQKSHHKGSSN
DPSFSKREPTLLQKLLSADIKRDRSRLLQVFRFMVTNSFFKDCPDKPLKFPMVAVKESGC
NEDMAEELSSLAAKDASKGSDNSMVEIIHNNDYEYHNDVCNYDDGGDEDDEEEEGIERAE
EEEGEIIN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctacctcactacaattcgtttcctcacaattccaaccaagttcacgtcaatggtagc
tctgctccatctcaccagattcaacctcaattgggtatcaagaataatcaagttccaatc
ccgttcagtaatgctaatgcacatttaagcaatgggcatggaggggccatgcccaatatg
ccaccttccatgatagctcaacccaatttcatgggtgtacctaacaaccttcatcctatg
caaagtaaccatctgggtatgcctcaattcggttctgttggtcctacatctcaaccaggt
cagccccatgttggatttttcagttcacaaaataatgcacacagtatgaactccgttgct
tcctttccgcttcatgggcaattctgcaatttggtgcagaatgtgaatcaagcggtttca
tcacagccgcctgggcaattacttgggcataacctgttaaaattaccacaacagatcaac
caaaatatgggtttgccatatggacaattctgtttgccaaatccattgcaaaatatgaat
caatttgtgcaaatgcaaatgcataatccatcccaacttggtcctaattatgcttttgcg
ggattgaatcaagcacctcaggctacagtttctcaaaattcccccttttttgcaactcat
cagttcggtaatgtgcattctaatcaggcaggccagcaagttaaccagaatcagcaaaac
ttggttctgcctgcaatgcaagggacacaggcaggccagcaagttaaccagaatcagcaa
aactcggttctgcctgcaaagcaagggacacagttttttcagggaaatcatacaaacact
ggtggtgtttacagttcaaataccaattggaaacattcaccaagcaaaagctttacaaag
catccaaaaagaggggtgcagccgcaagggggatttcagaattctcagttccatcatatg
aaaaatgcaaaggggaagtttgcttttcctaacgggaacaaaggaaaaggtttgataaat
gagagcaaaggaaagtttacaaaccaaggcggggaagggaaaagatctctttctttgccc
tatactgaacaagagattcagcggtggcgtgaagaacgcagaaggcactacccatcaaaa
tccaacatagagaagaagctaagtgaaaagctgataaactcagaggtcattgagagagag
gccaaaatgcgacgagagcaactgaaggagattcttacaaagcaggctgagttgggagtt
gaagttgccgaaataccatcatactaccttgaagattcaaatcaagggcatagaagagaa
gacaataagtctttcactaagaaggggagattaccaaacaattttggtaagagagaaaaa
tatgataaaaaggatcggtttgccaagaggcaaaaatctcatcacaagggttcatctaat
gacccttctttcagcaaaagggagccaaccttactgcagaaacttcttagtgcagatata
aagagagatagaagccgtctgctgcaggtgtttaggttcatggtgacaaactctttcttc
aaagattgtcctgacaaacctttgaaatttcctatggtagctgttaaagaaagtgggtgc
aatgaagacatggctgaagaactgtcttcacttgcagcgaaagatgcttctaaaggcagt
gacaattccatggttgaaataattcataacaatgattatgaatatcataatgatgtttgt
aattatgatgatggtggtgatgaagatgatgaagaagaagagggaattgagagagctgag
gaagaagagggagaaatcataaactag
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