Prunus mume (Japanese apricot): 103331278
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Entry
103331278 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103331278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103331278
03036 Chromosome and associated proteins [BR:
pmum03036
]
103331278
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103331278
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103331278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
103331278
NCBI-ProteinID:
XP_008232110
LinkDB
All DBs
Position
LG5:10003530..10010127
Genome browser
AA seq
1037 aa
AA seq
DB search
MGIDSGTCNALIVCQHKKRRISSNTGISLCETFSPLEVPTLEEADYYTQPSLKELAAREY
TDPGFSSRVLDFTVGRFGYGSIKYIGKTDIRRLELDKIVKFRRHEVIVYEDETAKPLVGQ
GLNKPAEVTLVLQTRPSNMDKRQKDNSVKKLRQIAEGQGAQFISFNPENGEWKFFVHHFS
RFGLSEDDEEDIMVEDAAAAQDLVEMNHGEISDADEETKMDPTGIVLSHSLPAHLGLDPV
KMKEMRMLMFPDGEEEAEELNQVPAHYNPSFGREYIRPSLQNTSQRMSDRSTPPPVRKTP
LALLEYKHGSFDSNSPGAILMSQENKVMPPKILKEGFKLDLKHETPVTKRHCRNIVDAGL
LMGRSFRVGWGPNGTLVHAGTPVGSTGSQMMLSSTINLEKVAIDNVVRDENNKVREELID
AAIDSPLDFHMGLLHQTEEIEVGSFNLRLQKVVSNRLMLSEICRSYVDIIEKQLEVPRLS
SSARLGLTHQIMIWELIKVLFSDRENGGKMKSLGADNEEEMVQDVKEASQEVDLEALPLI
RRAEFSYWLQENVCHRVQERMSSLNESSYLEYILLLLSGRQLDAAVELAASRGDVRLACL
LSQAGGSIVNRSDMAQQLDRWRSNGLDFHFIEKDRIRLYDLLAGNIDGAFHDVKVDWKRF
LGLLMWYQLAPSTSLPTVFRTYQHLLDEGKAPYPVPIYIDEGLVEESENFNAVKRYDLSY
YLMLLHASEESEVGFLKSMLSAFSSTHDPLDYHMIWHQRAVLEAVGAISSKDLHVLDMGF
VSQLLCFGKCHWAIYVVLHMPHCEDFPYVHANLIREILFQYCESWSSQESQRQAIENLGI
PKAWLHEAMAVYFNYYGDLAKALEHFLQCANWQKAHTIFVTSVAHKLFLSAEHSEIWRLA
TSMEDYKSEIENWDLGAGIYISFYLIRSSLQEADNTMNELDSLESKNSACREFLGQLKQS
LAVWGVLLPVDVRVVYSKMADEICNLLLSDIGDGPTRDVQLSCFDTVFSAPIPEDLRASH
LQDSLSLFTCFLSEVAT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgattctggaacttgtaatgcactaattgtgtgccaacacaaaaaaagaagg
atatcttcgaacactggcatttcgttgtgtgagacatttagtcctcttgaagtaccaact
ttagaagaagctgattactacacgcagccctctttgaaggaattggctgctcgagaatat
acagatcctggtttttctagtcgagttttggactttacagttggaagattcggttatgga
tccatcaaatatattgggaagactgacattaggagattggaattagataaaattgtgaag
ttccgcagacatgaggttattgtatatgaagatgaaactgccaaacctttggttggccaa
ggccttaacaagcctgctgaagtaactttagtgctacaaacaagaccatcaaatatggat
aagagacagaaagataatagtgtgaaaaaattgaggcagattgcggagggacaaggagct
cagtttatttcgtttaatccagaaaatggggaatggaaattttttgttcaccatttcagc
agatttggattgagtgaagatgacgaagaagacatcatggtggaagatgctgctgcagct
caagatcttgtggaaatgaaccatggtgagatttctgatgctgatgaagaaaccaaaatg
gatcccactggaattgtgctttcgcattctcttcctgctcatcttgggcttgaccctgta
aagatgaaagaaatgagaatgttgatgtttcctgatggggaagaagaagctgaggagctg
aatcaagtacctgcacattataatccatcctttggtagagaatacataagaccttcttta
caaaatacatctcagaggatgagtgatagatctactccaccacctgttcgaaaaacccca
ttggcattgctcgagtataagcatggtagttttgactcaaactctcctggggccattcta
atgtcccaagaaaataaggtcatgcctccaaagatactaaaagaaggttttaagcttgat
ctcaagcatgaaacaccagtgactaaaagacattgtcgcaacatagttgatgcaggtctg
ttgatgggtaggtcatttcgagtaggatggggtccaaatggaaccctagtccatgctgga
acacctgttgggagtactggttctcaaatgatgttatcatccacaatcaatttagagaag
gttgctattgacaatgttgttagggatgaaaataacaaagttagagaggaacttattgac
gcggctattgattctccactagattttcacatgggattacttcatcagacagaagagatt
gaagttggatccttcaacctaaggctgcagaaggttgtctctaatcgcttgatgctttca
gagatttgcaggagctatgtagatattattgagaagcagctggaagttcctaggctatct
tcctctgctcgtttgggtttgacacaccaaataatgatttgggaactgataaaagttctt
ttttctgatagggaaaatggtgggaaaatgaaatctttgggtgctgataatgaggaagaa
atggtgcaggatgtgaaggaagcttctcaagaagtcgacctggaagcattacctcttatt
cggagggcagagtttagttattggttgcaagagaatgtatgccatcgagtacaagaaaga
atgagctccttgaatgagtccagttatctggaatacatattattacttctgagtgggcgc
caattggatgctgctgtggaactggctgcttctcggggagatgtgagattggcatgtttg
ttaagtcaggctggagggtccatagtcaatcgttctgacatggctcaacagcttgatcgt
tggaggagcaatgggctggatttccatttcattgagaaagacaggataaggctttatgat
ttgctagctggtaatatcgacggtgcttttcatgatgttaaagttgattggaagaggttt
ctagggttattgatgtggtatcaattagcacctagcacctcattgcccactgtttttcgc
acttatcaacatcttcttgacgagggtaaggctccatatcctgttccaatttacattgat
gaaggactggtagaagagtctgagaattttaatgcggtgaaacgttatgacctatcatat
tatcttatgctgcttcatgccagtgaagaaagtgaagttggctttctaaagagcatgctc
agtgccttttcatcaacacatgatccacttgattaccatatgatctggcatcagcgtgca
gtgttggaagcagttggggctatcagctctaaagatcttcatgttcttgacatgggattt
gtttcccagctgttgtgttttgggaaatgtcattgggccatctatgtggtccttcacatg
ccccattgtgaagattttccatatgtccatgctaatcttattcgggaaatcttgttccaa
tattgtgaatcctggagttctcaagaatcacaacgccaagccattgagaacttgggcatt
cctaaggcatggcttcatgaggctatggctgtttatttcaactactatggggatcttgca
aaggcccttgaacactttcttcaatgtgcaaattggcagaaagcacacactattttcgta
acttctgttgcccacaaattattcttgtctgctgaacactcagagatatggaggcttgca
acttccatggaggactacaaatcagaaattgaaaattgggacctgggagctgggatttat
atttcattctatctaattagaagttcattgcaggaagcggacaataccatgaacgaactg
gattctctggaaagcaaaaattctgcatgtagagagtttcttggtcagttaaagcagtct
ttggctgtttggggtgtcctgctacccgttgacgtgagggtagtttattcaaagatggca
gatgagatatgcaatttgcttttatctgatattggagacggcccaacacgagatgttcaa
ttaagttgttttgacaccgtttttagtgctcccattcctgaagaccttcgcgcaagtcat
ttgcaagattcactgtctctctttacatgctttctttcagaggttgctacatag
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integrated database retrieval system
