Prunus mume (Japanese apricot): 103331308
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Entry
103331308 CDS
T03196
Name
(RefSeq) WD repeat domain-containing protein 83
KO
K13124
mitogen-activated protein kinase organizer 1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103331308
Spliceosome [BR:
pmum03041
]
Complex C
Other components
Complex C specific factors
103331308
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_like
NBCH_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_Vps41
WD40_CFAP43
Beta-prop_IFT140_1st
VID27
Beta-prop_HPS5
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
103331308
NCBI-ProteinID:
XP_008232154
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All DBs
Position
LG1:13443595..13446881
Genome browser
AA seq
299 aa
AA seq
DB search
MSVADLPKTEANVLRGHEGAVLAARFNSDGNYCLSAGKDRTIRLWNPHRGIHIKTYKSHG
REVRDVHVTSDNSKLCSCGGDRQIFYWDVATGKVIRKFRGHEGEVNSVKFNEYSSVVVSA
GFDQSLRAWDCRSHSNEPIQIIDTFTDSIMSVCLTKTEIIGGSVDGTVRTFDMRIGREVS
DDLGQPVNCISMSNDGNCILASCLDSTLRLIDRSSGELLQQYKGHTCKSYKLDCCITNTD
AHVTGGSEDGFIFFWDLVDASVATKFRAHSSVVTSVSYHPKDNCMISSSVDGTIKVWKS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcggatctgccaaagacagaggcgaacgtgctgagaggccacgagggggca
gtattagcagcgaggttcaatagtgacggcaattactgcctcagcgccgggaaagaccga
accatcagactctggaacccacatcgcggcatccacatcaagacctacaagtcccatggc
cgcgaagtacgtgacgttcatgtcacctcggacaactcgaaattgtgttcttgcggtggt
gacagacaaatcttttattgggatgtggcgacggggaaagtcattcgaaagtttcgaggt
catgaaggggaggtgaattctgtgaagttcaatgagtattcatctgttgtggtctcggca
ggttttgatcagtccttgcgtgcttgggactgcaggtctcacagcaatgaacccattcag
ataatcgacacgtttacagacagtataatgtctgtttgtttaacaaagaccgaaattatt
ggtggaagtgttgatggaactgtgagaactttcgatatgcgtatagggagagaagtatcc
gatgacttgggacaacctgtaaactgcatctcaatgtcaaatgatggtaactgcatacta
gccagttgcttagattcgactttacgtctcattgacaggtcttctggtgaattacttcaa
caatacaaaggtcatacttgtaagtcttacaaattggactgctgtattaccaacaccgat
gcccatgtaaccggtgggtctgaggatggcttcattttcttctgggatctggtagatgca
tctgtggcaacaaagttcagagctcattcgtcagtggtaacaagtgtgagttatcaccca
aaggacaactgcatgataagttcctctgttgatggcaccattaaggtgtggaaatcttga
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