KEGG   Prunus mume (Japanese apricot): 103331313
Entry
103331313         CDS       T03196                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03083  Polycomb repressive complex
pmum04120  Ubiquitin mediated proteolysis
pmum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103331313
   04120 Ubiquitin mediated proteolysis
    103331313
  09126 Chromosome
   03083 Polycomb repressive complex
    103331313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103331313
   04121 Ubiquitin system [BR:pmum04121]
    103331313
   03036 Chromosome and associated proteins [BR:pmum03036]
    103331313
Membrane trafficking [BR:pmum04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    103331313
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     103331313
   Cul7 complex
     103331313
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103331313
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     103331313
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB Flu_PB2_4th
Other DBs
NCBI-GeneID: 103331313
NCBI-ProteinID: XP_008232155
LinkDB
Position
LG5:complement(10419443..10419910)
AA seq 155 aa
MASDEMKKITLKSDDNQTFEVEVAVAMQSQTIKHMVEDDCADDVIPLSNVTSSALAKVIE
YCKKHHEEDADVKNKESLKSWDAEFVKVDLSKLFDLILAANYLDIKSLLDLTCQTVANMI
QDKTPEEIRVIFNIENDFTPEEEKEIRKENEWAFE
NT seq 468 nt   +upstreamnt  +downstreamnt
atggcctctgacgagatgaagaagataaccctaaagagcgacgacaaccagaccttcgag
gtggaggtggctgtggccatgcagtcgcagaccatcaagcacatggtggaggatgactgt
gctgacgacgtgatacctctgtcaaatgtgaccagcagcgccctagcaaaggtgatcgag
tactgcaagaagcaccatgaagaggatgccgatgtcaagaacaaagagagtctcaagagc
tgggacgctgagttcgtgaaggtggacttgagcaagctgtttgacttaatcttggctgca
aactatctggacatcaagagcctactggatttgacttgccagactgtggcgaacatgatc
caggacaagacacctgaagagatccgtgtgatcttcaacatcgagaatgattttacgcct
gaggaagaaaaggagattcgtaaggagaatgagtgggcattcgagtga

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