Prunus mume (Japanese apricot): 103331403
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Entry
103331403 CDS
T03196
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
pmum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103331403
03083 Polycomb repressive complex
103331403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103331403
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103331403
Histone modification proteins
HAT complexes
HATB complex
103331403
HDAC complexes
Sin3A-HDAC complex
103331403
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103331403
PRC2.2
103331403
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103331403
Heterochromatin formation proteins
Other heterochromatin formation proteins
103331403
Chromatin remodeling factors
NuRD complex
103331403
NuRF complex
103331403
NuRF complex (fruit fly)
103331403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD_LRWD1
NBCH_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
103331403
NCBI-ProteinID:
XP_008232246
LinkDB
All DBs
Position
LG5:11510831..11515424
Genome browser
AA seq
422 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaagaaatgaggggagagattgaggagaggctgataaacgaggag
tacaagatatggaaaaagaacacacctttcttgtacgatctggttataacccatgcccta
gaatggccttcgcttacagtcgagtggcttccggaccgagaagagcctccagggaaggac
tattcggtgcagaagatgattctggggacccatacctccgagaacgagcctaattacctt
atgcttgctcaggtacagctgccattggaggacgcagagaacgatgctcgccattatgat
gatgatcgagctgaggttggcggttttggttgcgccaatggcaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgttatatgcctcagaatccatttatt
attgccacaaagacagtcaatgctgaagtttttgtgttcgattatagcaaacacccatct
aagcctcctttagatggtgcatgcagtcctgacttgaggctgaggggccacagcactgaa
ggatatggtttatcatggagtaagttcaagcagggtcatttactcagtggttctgatgat
gctcagatatgcctgtgggacattaacgcaactcccaagaacaaaacccttgaggctatg
caaatatttaaggttcatgaaggtgtggtagaagacgtagcatggcatttgaggcatgaa
tacttatttggttctgttggtgatgatcaataccttcttatatgggatctccggactcca
tctgttaccaagcctgtccaatctgtagttgctcatcaaagtgaagttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatccactgacaaaactgttaagctg
tttgatctacgcaaaatcaatactgctctccacacctttgattgccataaggaggaggtt
ttccaagtcggttggaatccgaaaaatgaaactatcttagcttcttgttgtcttggcagg
cgactcatggtgtgggatcttagcagaatcgacgaagagcagacaccagaggatgctgaa
gatggtccaccggagttgctttttattcatggaggtcacaccagtaaaatatctgatttt
tcgtggaacccatgtgaagattgggttgttgctagtgttgctgaagataacatactccaa
atatggcagatggccgagaacatttaccatgacgaagatgatttacccgaagagccggca
aagccttag
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