KEGG   Prunus mume (Japanese apricot): 103331424
Entry
103331424         CDS       T03196                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03030  DNA replication
pmum03410  Base excision repair
pmum03420  Nucleotide excision repair
pmum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103331424
   03410 Base excision repair
    103331424
   03420 Nucleotide excision repair
    103331424
   03430 Mismatch repair
    103331424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmum03032]
    103331424
   03036 Chromosome and associated proteins [BR:pmum03036]
    103331424
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103331424
DNA replication proteins [BR:pmum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103331424
  DNA Replication Termination Factors
   ELG1-RFC complex
    103331424
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103331424
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103331424
  Check point factors
   HRAD17(Rad24)-RFC complex
    103331424
SSDB
Motif
Pfam: RCF1-5-like_lid RuvB_N Rad17 RsgA_GTPase AAA_22 AAA_11 AAA AAA_16
Other DBs
NCBI-GeneID: 103331424
NCBI-ProteinID: XP_016649718
LinkDB
Position
LG5:complement(11187039..11188855)
AA seq 347 aa
MYTAIKPSTRSTVNASPKNSETSLVEESIEREEVMKSSKEYNKEKPLRERVRAAARPKNE
IKVMNEAQKEYAWADKYQPLCLEDFICNKDKATQLQALARGGACGHFIFEGPPGVGKRTM
IWAMLREAFGRDTIHAREEFKAFNLKGEMVGSIEVHVKQSPQHVEVNLSELKGYEKHVIV
ELMRETQDKTTNKALPCGLDNCRAIILYEADKLSTDALLYIKWLLERYKGCNKVFFCCSD
VSKLQAIKSLCTVVELLPPSKTETVAVLKFIAKQEGIDLPHELAERFAENSKNNFCLAIR
SFEATWKKCYPFKENQVILTGWEDNIADIAKNMIEEQSPKQYALSTS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtacaccgcgatcaaaccctccacgcgttcaacagttaatgcttcaccgaagaattca
gagacgtctttggtggaggagagcatagagagggaggaggtcatgaagagtagcaaagaa
tataacaaggagaagccattgagggagagagttagagcagcagctagaccaaaaaacgaa
ataaaggtgatgaatgaagctcagaaggagtatgcgtgggcagacaaataccaacctctg
tgcttagaagatttcatatgcaataaagacaaagcaactcagctgcaggctttggccaga
ggaggagcatgtgggcatttcatctttgaaggaccaccaggcgtggggaagagaacgatg
atctgggctatgcttcgcgaggcgtttggacgcgacacaatacatgccagggaggaattc
aaggcatttaacttgaagggtgaaatggttggtagtatagaagtacatgtaaagcaatcc
cctcaacatgtagaagtgaatctttctgaactgaagggctatgagaagcatgtgattgtt
gaactcatgagggaaacacaggacaagacgaccaacaaagctttgccctgcggcctcgac
aactgtcgagcaataatcttatatgaggcagacaagctatctacagatgccctactttat
ataaagtggctattagaaaggtataaagggtgtaataaggtcttcttctgctgctctgat
gtctcaaagcttcaggcaatcaaatcactttgcactgtcgttgagcttttaccaccttca
aagactgagactgttgcagttttaaagttcatagctaagcaagaaggcatagatttgcca
catgaattggctgaaaggtttgctgaaaattctaagaacaatttctgtctagccattcgt
tcattcgaggctacttggaagaaatgctatcctttcaaagaaaatcaagtcattttgaca
ggttgggaagataatattgcagatattgccaagaatatgatcgaagagcaaagcccaaaa
cagtatgctctttcgactagttga

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