Prunus mume (Japanese apricot): 103331504
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Entry
103331504 CDS
T03196
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103331504
03012 Translation factors [BR:
pmum03012
]
103331504
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103331504
mRNA cycle factors
Stress granule specific factors
103331504
Translation factors [BR:
pmum03012
]
Eukaryotic type
Initiation factors
eIF-4
103331504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
103331504
NCBI-ProteinID:
XP_016650090
UniProt:
A0ABM1LRR3
LinkDB
All DBs
Position
LG5:complement(12293963..12303486)
Genome browser
AA seq
1872 aa
AA seq
DB search
MSFNQSRSDKNETQYRKTGRSASSNQQHRGYSPAYPKGTAAGAGGPAPSIPPHRSFKKNN
NNAQGGQSRGSVTTVNPLDSGIASTQRGGVQNGAHVQPQLHGGSDALVATTAPRTTDASA
PQRSTRTVPKAPTSQSASVTSDTRTPTTPAKIPGDASQGFAFQFGSISPGFMNGMQIPAR
TSSAPPNLDEQKRDQARHDSYRTVPSVPTPNIPKQQLPRKDPASMDQPNASEAHLVPKVK
KDVQPSHATPVSQTQKPSALPMAGISMPMPFHQQQVSLQFGGPNQQIQSQGMSANSVQIP
MPMSVPIGSNQVQQPVFVPGLQPHPMQHQGIMHQGPFTPQMGPQVPQLGSMGISIAPQYP
QQQGGKFGGPRKTSVKITHPDTHEELRLDKRTDSYSDGGPSAPRTHPNVPPQSQPIQSFA
PSHHSSYYANSYSGSLFFPAPNSHPLTSSHMPPSSQAPRFSYPVSQGPQNVPFINTPAHN
ALPVNKAGPPMHNVVDPPNVEHARDIHNVPAAVPSATIPVVVKAAVGTVGEKVVDPVPNS
SAAVEKGELPKASKSSGEINQFHPQRYSELSTDGLMHSDQSILKSLPVTAKASAGNPAAV
LIESQVSNPLSSASAAPTEESVPVVTTTETRRKETLSRSNSIKDQLKKPGKKGNNQAQHQ
VVGQSISTSSTPSRASEHGISSSSDVSETVEANTTLAAVSGDSVSESVKELLSNVSAATA
DGSESKAEAIGEGIIPISSEISGAGVVGSSSDSIHHGQLDNSLLLVKQGKHDLGGAEKQA
EQSLSENYRQDTNSRGISAEPISIKPLEPVKENAENSEGSAVATSETAQGGQAQHESCHA
DFDGKDASSSRSDTMGSKEVAVSKCSKLDQQYALVQTTEVSGTTMTNEGINVENTGGGGG
SIENIGSGGDPLTVSGSKDKPLPELSRQKSTTAKGKKKRKEILSKADAAGMTSDLYGAYK
NPEEKKGIASPESMESTTGIVSKQVATDAPQQDAVGREEDAPSKAEPDDWEDAADISTPK
LEASDNGEQVRGGGVHSDKDGHGHGAKKYSRDFLLKFSMQFTELPEGFEIMSDVAEILNA
HINTSPSIDYDSLPSPGRIIDRQGGAIRLDRRGSGLIDDDRWNKGGAANFRAGQGVNFGV
LRNPRPSTPVQQHVRGILPGPTQSVGPQGGMQRNNSDADRWQRASNFQPKGLMPYPHTPL
QVMHKAERKYEVGKVSDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNATTLTGVI
SQIFDKALMEPTFCEMYANFCFYLAGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQE
EANKADEEGEVKQSEEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQ
QQTPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFDRMKSLSNNMKLSSRVRFMLKDSI
DLRKNKWQQRRKVEGPKKIEELHRDAAQERQAQASRLGRGPGMNPSARRTPMDFSPRGST
MLSSPNPQMGGFRGMPAQVRGYGSQDVRADERHSYEGRTLSVPLTQRPLGDDSITLGPQG
GLARGMSIRGPPSMSAAPQAEISPSVGDSRRMAAGLNGYSSLSERPTYNPREEHMPRHLP
DRFAGPAAYDHSNAPERNVNFGGRDPRNLDRSFDRSRPASPATRAHAPALTQNVPQEKVL
TEDHLRDMSLAAIKEFYSARDEKEVVLCIKELNSPSFHPSMISLWVTDSFERKDTERDLL
AKLLVNLTKSHDGTLSQSQLIKGFETVLSTLEDAVNDAPKAPEFLSLIFAKVILENVVSL
KQIGEIIYEGGEEPGHLLEVGLAGNVLGNILEIIKLEKGDSVLNEIRTASNLRLETFRPP
DPRRSRILEKFI
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaaggtcggataagaacgagacgcagtatcggaaaacagggcga
tccgcaagctctaatcagcagcacaggggatactcacccgcgtaccctaagggcaccgcc
gctggcgccggcgggcccgccccttccatccccccccaccgcagttttaagaagaataat
aacaatgcacaaggagggcaatccaggggaagtgtaaccactgtaaatcctctggattct
ggtattgcttctacacaacgtggtggtgtacagaatggagcgcatgtacagccccaattg
catggaggctctgatgcactggttgcaaccacagctcccaggactactgatgcatcagcc
cctcagagaagcacccgaactgttccaaaggctccaacttctcaatctgcctccgtgact
tccgacacaagaacgcccactacaccagctaagatcccaggagatgcttcccagggattt
gcctttcagtttgggtctataagtcctggtttcatgaatgggatgcagattcctgctcga
actagctcagcacccccaaatttggatgagcagaaacgtgatcaggcgcgccatgattcg
tatagaaccgtgccctcagtgccaactcctaatattcctaagcagcaattaccaaggaaa
gatccagcttccatggatcaacctaatgcttctgaggctcatctggtgcccaaggttaaa
aaggatgtgcaaccctcacatgcaacccctgttagtcaaactcagaaaccttctgctcta
ccaatggctgggatatccatgccaatgccatttcatcagcaacaggtttccttgcaattt
ggtggccctaaccagcagattcagtctcagggtatgagtgccaattcagttcaaattcca
atgcctatgtcagtaccaattggtagcaatcaagtacagcagccggtgttcgttccaggt
ctgcaaccccatccaatgcagcaccagggaattatgcatcaaggcccttttaccccccaa
atgggtcctcaggtgcctcagttaggcagcatggggatcagcatagcgccacaatacccc
caacaacagggtgggaagtttggtggccctcgtaaaacttctgtcaagattacacatcca
gatacacatgaagagttgaggcttgataaacgaacagattcatattcagatggtgggcca
tctgcccccaggactcaccctaatgttcctcctcaatcccagcctatacaatcatttgcc
ccttcccatcatagcagctattatgccaattcttattctggttccctattttttccagct
ccaaattctcatcctttaacgagtagtcatatgccacccagttcacaggcaccaagattt
agctatccagtgagccagggtccccaaaatgtacccttcattaatacaccagctcataat
gccctgcctgttaataaggctgggccccctatgcacaatgttgtggatccacccaacgtg
gaacatgcacgtgatatacataatgtacctgctgctgttccatcagcaactattcccgtc
gtagttaaagcagctgttggaactgttggagagaaggttgttgacccagtaccaaacagc
tccgctgctgttgaaaaaggtgaacttcccaaggcttcgaaatcatctggagaaattaac
caatttcatcctcagaggtactctgagctttcaactgatggcttaatgcacagtgaccaa
tcaatcctcaaatcattgccagtgacagcaaaagcatctgcaggtaatcctgctgctgta
ttaattgaaagccaggtatcaaatcctttgtcctctgcttcagctgctccaactgaggag
tctgtaccagttgtgaccaccaccgagaccagaagaaaggaaacgcttagccgttcaaac
tcaattaaagatcagctgaagaagccaggcaagaaaggaaataatcaagcacagcatcag
gttgttgggcagtctatctctacatcaagcactccctctcgggcttcagaacatggtata
tcttctagtagtgatgtttctgaaactgtagaagctaatacaactcttgctgcagtaagt
ggtgattctgtgtctgaatcagtgaaggaattactctcgaatgttagtgctgctacagct
gatggttctgaatctaaggctgaagcaattggggaaggcattatccccatctcttctgaa
atatctggtgctggggttgttggcagttcttcagattctattcatcatggtcaactagac
aattctttattgctagttaaacagggaaaacatgacttggggggagcagaaaaacaggca
gaacaaagtttgtctgaaaattacagacaggatactaatagtcgtggtatttctgcagaa
cctatctccataaaacctctggaacctgttaaagaaaatgcagagaattctgaaggcagt
gctgtcgcaacctcagaaactgcacaaggagggcaggcccaacatgagagttgccatgca
gattttgacggaaaggatgcctcttcaagcagaagtgataccatgggtagtaaagaagtt
gctgtttcaaagtgcagcaaattagaccagcagtatgctcttgttcaaactacagaagtt
tcaggtacaactatgacaaatgaagggataaatgtggagaatactggtggtggtggggga
agtattgagaatattggtagtggcggggatccacttacagtgtcaggctccaaggacaaa
ccccttcctgaactgagtagacagaagagtactactgcaaaagggaagaagaaaagaaaa
gaaattctatccaaggcagatgctgctggtatgacttctgatctttatggggcatataaa
aaccctgaagaaaagaaaggtattgcctctcctgaaagcatggaaagcactactggcata
gtttcaaagcaggtagctactgatgctcctcagcaagatgctgttgggagagaagaagat
gcaccgagtaaagctgagccagatgattgggaagacgctgctgacatctctaccccaaaa
ctggaagcctcagataatggagaacaggtccggggaggaggggtgcattctgacaaagat
ggacatgggcatggggcaaagaagtattccagagattttcttttgaagttttctatgcaa
tttactgagcttccagaaggttttgaaataatgtctgatgtagcagagattttgaatgcc
catatcaatacttctccttctattgattatgattcactccctagtccaggaagaattatt
gacaggcagggaggggcaataagacttgatcgtcgtgggagtggactgattgatgatgat
agatggaataagggtggtgctgccaatttccgagctggccaaggagtaaattttggtgtt
ttgaggaatccacgtccatcgacaccagttcagcagcatgttagagggatccttcctggg
cctactcagtctgttggtcctcagggagggatgcaaagaaataattctgatgctgacagg
tggcagagagcttcgaattttcaaccaaagggtttgatgccttatcctcatactccatta
caggtgatgcacaaagctgagaggaagtatgaagtgggtaaagtgagtgatgaagagcag
gccaagcaaaggcagttaaaggctatattaaacaagctaactccacaaaattttgaaaaa
ctatttgagcaagtaaaagctgttaatattgataatgcgacaacactaactggtgtcatc
tcacagatatttgacaaggctcttatggagcctactttttgtgagatgtatgctaacttc
tgtttttatcttgcgggagagttacctgatttcagtgaagacaatgaaaagataactttt
aagagattgcttttgaacaagtgccaggaggaatttgagagaggagaaagagagcaagag
gaagccaataaggctgatgaggaaggtgaggtgaaacagtctgaagaggaaagagaagag
aaaagaattaaagcgcgaagacgaatgttgggtaacattagattaattggggagctatac
aagaaaaaaatgttgacagagaggattatgcacgaatgcattaagaagttgttaggtcag
caacagactccagatgaggaagatattgaagctttgtgcaaactaatgagcacaattggg
gagatgattgatcatcccaaagccaaggagcacatggatgcatattttgacaggatgaaa
agcttatcgaataacatgaaattatcttctagagttaggttcatgttgaaggattcaatt
gacttgagaaagaataaatggcagcagaggaggaaagtagagggtccgaaaaagattgag
gaactgcacagagatgctgcacaagaacgacaggcacaagctagtaggctaggccgtggt
ccaggaatgaacccatcagctagaaggactcctatggattttagtccaagaggatcaact
atgttatcttcaccaaatccccagatgggtggtttccgtgggatgcctgctcaggtccgt
ggctatggtagtcaggatgtccgtgcagatgaaagacattcttatgagggtaggaccttg
tcagttcccttgactcaaagacccctcggtgatgattctattactttgggtccccagggt
ggacttgctagaggaatgtccatcagaggaccaccatcaatgtcagctgctcctcaggct
gaaatatctcccagtgtcggagactccaggaggatggcagctggtttgaatggttacagt
tctctttcagagcgtccaacttacaacccaagggaggaacatatgccaagacatttgcca
gatagatttgcaggtccagcggcttatgatcactcaaatgcaccagagcgtaatgtaaat
tttggtggtagggacccaaggaatttggatcgtagttttgatagatctcgtccagcttca
ccagccacgcgtgcacatgctcctgctttaacacaaaatgttcctcaagaaaaggtgttg
actgaagaccatctcagagatatgtccttggcagcaattaaagaattttacagtgcccga
gatgagaaagaggttgttttatgcatcaaagagttgaactcaccaagcttccatccatca
atgatatctctttgggtcacagactcttttgagaggaaggacacggaaagagatctcttg
gcaaagcttctagtgaaccttacaaagtcccatgatggcactttgagtcaatcccagctc
atcaaagggtttgaaactgttctctccaccttggaggatgccgtgaatgatgcccctaag
gcaccggagtttcttagcctcatctttgccaaagtcattctagaaaacgttgtttccttg
aaacagattggggaaataatatatgaaggtggagaggagccagggcatcttctggaagtt
gggcttgcgggcaatgttcttggaaatatcctggagattatcaaattagagaaaggagat
agtgttttgaatgagattcgtacggcctccaacttgcggttggagacttttcggcctcca
gatcctcgcagatcaaggatactagaaaagtttatttag
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