Prunus mume (Japanese apricot): 103331615
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Entry
103331615 CDS
T03196
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00450
Selenocompound metabolism
pmum00970
Aminoacyl-tRNA biosynthesis
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
103331615
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103331615
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103331615
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103331615
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
103331615
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103331615
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103331615
Prokaryotic type
Other AARSs
103331615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
JCAD
tRNA-synt_1e
DUF3952
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
103331615
NCBI-ProteinID:
XP_008232482
LinkDB
All DBs
Position
LG5:13588637..13595992
Genome browser
AA seq
801 aa
AA seq
DB search
MGDLTVTSSEDQKAAKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRIR
GYNTVYICGTDEYGTATETKAIEEQCSPQEICDKYHAIHREVYQWFNISFEKFGRTSTPQ
QTEVCQAIFKKLLENDWLSENTMQQLYCDTCKRFLADRLVEGTCPTQGCDYASARGDQCE
NCGKLLNPTELKDPKCKVCKTTPRIRDTNHMFLELPLLRDKLEEYINKTSVAGSWSQNAI
QATNAWLKEGLKQRCITRDLKWGVPVPHDNFKDKVFYVWFDAPIGYVSITKCYTDDWEKW
WKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKG
IGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLS
FVAKPSGQGYGSIIPDAPSADSDLLTEKLAEKVGKCVEQYIEAMEKVKLKQGLKTAMSIS
SEGNAYLQESQFWKLYKEDQPRCAVVMRTSVGLVYLLACLLEPFMPSFSLEVFKQLNLPP
ETHISLCDDKGDIDRARRPWEIVPIGHKIGKPEPLFKELKDEEVESLRKKFAGSQADRKE
REEAEAVKVAAQLKKMKVSDNSGKKKQQATKSAAEAEISISRLDIRVGLITKAQKHPDAD
SLYVEEIDVGEGQTRTVVSGLVKYIPIEEMQNRKVCVLCNLKPATMRGIKSQAMVLAAST
SDHATVELVDPPKAAQVGERVTFPGFVGEPDEVLNPKKKVWETLQVDLHTNTDLVACYRD
IPLTTSAGVCTVSSICGGSIR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggagacctcacagttacctccagtgaggaccaaaaggctgccaagctacccatccct
ggcaagcgtaacatcttgatcaccagtgccttgccttatgtcaacaatgtccctcacctt
ggcaatattattggctgcgtgttgagtgccgatgtctttgcccgctactgccgtattcga
ggctacaatacggtttacatatgtggaactgatgagtacggcacagcgacggagacaaaa
gctatagaagagcagtgtagcccccaagagatatgtgacaaatatcatgcaattcatagg
gaggtttatcagtggtttaacataagctttgagaaatttgggcgcacatcgacaccacaa
caaacagaagtgtgccaagcgattttcaagaagctattggagaatgattggctttcagag
aacacaatgcagcagctttactgtgacacatgcaaacggttcttagccgataggcttgtg
gaggggacatgcccaactcaaggctgtgactatgcatctgcacgaggagatcaatgtgag
aactgcggaaagcttttgaatccgacggaactaaaagatcctaaatgcaaggtctgtaag
acaactccacggattcgtgatacaaaccacatgtttttggaacttcctttgctcagggat
aaattggaagagtacatcaataaaacatcagtggctgggtcttggagccagaatgccatt
caagcgacaaatgcatggctcaaagaggggcttaaacaacgatgtattaccagggatcta
aagtggggtgttccagttccacatgataacttcaaggacaaggttttctatgtgtggttt
gatgctcctattggatatgtctccattactaaatgctacactgatgattgggagaaatgg
tggaagaatcctgagaatgtggagttgtatcagtttatgggcaaagataatgtgccattc
catacagtgatgtttccatcaacacttcttggaactggtgaaaattggactttgatgaag
actatcagtgtcaccgagtacttaaactacgaagcaggaaagttttctaagagtaaaggc
ataggggtttttggaaatgatgcaaaagatacgaacattcctgttgaagtatggagatat
tacttgctaactaataggcctgaggtatcagacacattatttacgtgggccgacttgcaa
gcaaaactgaatagcgaattgctgaataatttgggcaactttataaatcgcgttttgagt
tttgttgccaaaccttcaggtcaaggatatggctccattattccagatgctccaagtgca
gactcagatcttttgacagagaaactagctgaaaaagttggtaaatgtgtggagcaatat
atagaagcaatggagaaggttaaactaaagcaaggactgaaaacagcaatgagcatttct
agtgaagggaatgcatatctgcaagaaagccagttctggaagctttacaaggaggaccaa
cctcgttgcgctgttgttatgagaacttcagttggactagtgtatcttcttgcttgtttg
ttggaaccttttatgccatcattttctctcgaagtatttaagcagcttaatttacctcct
gagacgcacatatcactttgtgatgataaaggagatattgatagggcaagacggccttgg
gagattgtacctattggtcacaagattgggaaaccagagccattgttcaaggaattgaaa
gatgaagaagtggaatccttaaggaagaagtttgctggaagtcaagcggacaggaaggag
cgggaagaagctgaagcagtgaaggtggctgcacaactcaagaaaatgaaagtttcagac
aacagcggaaagaaaaagcaacaggccacaaaatcagcagctgaagcagagatttccatt
tctagacttgatattcgtgttggcctcattacgaaagctcagaagcaccctgatgctgat
tcgctttacgtagaagagattgatgttggtgaaggacagactagaacagttgtgagtgga
cttgtcaagtatatacccattgaagaaatgcagaaccggaaggtctgtgttctttgtaat
ctgaagccagcaaccatgcggggtattaaatcacaagcaatggttcttgctgcttcgacc
agtgaccatgccacggttgaattggttgatccaccaaaagctgctcaagttggcgagaga
gttacatttccagggttcgtcggtgaacctgatgaggtgttgaaccccaagaagaaagtg
tgggagaccttgcaagtggatctgcacactaacactgacctagtggcctgctacagagat
attcccctcacaacatcagctggtgtttgcactgtatcctcaatttgtggcgggtcaatt
agatag
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