Prunus mume (Japanese apricot): 103331628
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Entry
103331628 CDS
T03196
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
pmum03015
mRNA surveillance pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103331628
09122 Translation
03013 Nucleocytoplasmic transport
103331628
03015 mRNA surveillance pathway
103331628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103331628
03041 Spliceosome [BR:
pmum03041
]
103331628
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103331628
Spliceosome [BR:
pmum03041
]
Complex C
Other components
EJC/TREX
103331628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
103331628
NCBI-ProteinID:
XP_008232495
UniProt:
A0ABM0P076
LinkDB
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Position
LG5:13788763..13791894
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AA seq
151 aa
AA seq
DB search
MAGEEENSEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYVTPA
VVRECRRIISESEILKEDDVNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgaggaagagaacagcgagttctacctgaggtactacgtggggcacaagggt
aagttcgggcacgagttcttggagttcgagtttcgacccgacgggaagcttcgctacgcc
aacaactccaactacaagaacgacaccatcatccgcaaggaggtctatgtcacgcctgct
gttgtcagagagtgtcgtcgtatcatttcagagagcgagatcttgaaggaagatgatgtc
aactggccagaacctgaccgtgttgggcggcaggagcttgaaattgtaatggggaatgag
catatctcctttactacttcaaagattggatcccttgttgatgtccagagcagtaaagat
cctgaaggtcttcgcatcttttattatcttgttcaggatctgaagtgctttgtgttctca
ctcatctctctccacttcaagatcaagcctatataa
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