KEGG   Prunus mume (Japanese apricot): 103331628
Entry
103331628         CDS       T03196                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
pmum03015  mRNA surveillance pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103331628
  09122 Translation
   03013 Nucleocytoplasmic transport
    103331628
   03015 mRNA surveillance pathway
    103331628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103331628
   03041 Spliceosome [BR:pmum03041]
    103331628
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103331628
Spliceosome [BR:pmum03041]
 Complex C
  Other components
   EJC/TREX
    103331628
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 103331628
NCBI-ProteinID: XP_008232495
UniProt: A0ABM0P076
LinkDB
Position
LG5:13788763..13791894
AA seq 151 aa
MAGEEENSEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYVTPA
VVRECRRIISESEILKEDDVNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 456 nt   +upstreamnt  +downstreamnt
atggctggtgaggaagagaacagcgagttctacctgaggtactacgtggggcacaagggt
aagttcgggcacgagttcttggagttcgagtttcgacccgacgggaagcttcgctacgcc
aacaactccaactacaagaacgacaccatcatccgcaaggaggtctatgtcacgcctgct
gttgtcagagagtgtcgtcgtatcatttcagagagcgagatcttgaaggaagatgatgtc
aactggccagaacctgaccgtgttgggcggcaggagcttgaaattgtaatggggaatgag
catatctcctttactacttcaaagattggatcccttgttgatgtccagagcagtaaagat
cctgaaggtcttcgcatcttttattatcttgttcaggatctgaagtgctttgtgttctca
ctcatctctctccacttcaagatcaagcctatataa

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