Prunus mume (Japanese apricot): 103331669
Help
Entry
103331669 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: CLP protease regulatory subunit CLPX3, mitochondrial
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmum03110
]
103331669
Chaperones and folding catalysts [BR:
pmum03110
]
Heat shock proteins
HSP100
103331669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
MCM
Mg_chelatase
RuvB_N
Sigma54_activat
Sigma54_activ_2
AAA_14
AAA_16
AAA_7
ABC_tran
IstB_IS21
nSTAND3
DEAD
AAA_28
AAA_18
T2SSE
TsaE
RNA_helicase
Zn_ribbon_4
AAA_24
AAA_29
AAA_33
NACHT
Motif
Other DBs
NCBI-GeneID:
103331669
NCBI-ProteinID:
XP_008232534
LinkDB
All DBs
Position
LG5:13890281..13898843
Genome browser
AA seq
708 aa
AA seq
DB search
MSGMLRWKKVKHIAELQQRFTQVSPISTHLNHLHVTSHRRRESLIGVQERYKWDHGGSAS
GGDVRTRKIRAEANCPRCSFNRMDLLFSDRRLPNLSPPDDSSSSTSTKTTTKTKADDSEF
HQYQALNLCPNCKTAYYFRPHQIAPLQGTFVEIGRLTNTTTTSSNRNASRTNSDNKSHSR
NTQNTNNSNGGGGGGGGGGDSMPNINSNGLRVSFWDTLRSYANGVDPPDNWPPPSPPPPP
PGNGLAVHTPPGPPFAPGVNVIRASGPPGDAGGDNNNAWGGSNLGKDLPTPKEICKGLDK
FVIGQQRAKKVLSVAVYNHYKRIYHASLQKGSGGESGIPNTIDDDDKVELEKSNVLLMGP
TGSGKTLLAKTLARFVNVPFVISDATTLTQAGYVGEDVESILYKLLMAAEFNVQAAQQGI
VYIDEVDKITKKAESLNISRDVSGEXXXQQALLKMLEGTIVNVPEKGARKHPRGDNIQID
TKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGVTDAVVTSSLLESVESSD
LIAYGLIPEFIGRFPILVSLTALTEDQLVQVLTEPKNALGKQYKKLFTMNNVKLHFEEKA
LRLIAKKAMAKNTGARGLRALLESILTEAMYEIPDVKTGIDRIDAVVVDEESVGSVNTPG
CGGKLVRGDGALERYLSEIKLKHSVENVEAAEGEAEGESEQSSRAMSM
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatgctcagatggaagaaggtgaagcatatagcagagctccagcagcggttc
actcaggtatccccaatctcgacgcacttgaaccaccttcatgtcacgagccatcgccga
agagagtctctgatcggagtgcaggagcgctacaagtgggaccacggcggctctgcctcc
ggcggcgatgttcgcacccgcaaaatcagggcggaggcgaattgcccccgctgctccttc
aaccgcatggatctcctcttctccgatcggcgcttacccaacttatctcctccagatgat
tccagcagcagcaccagcaccaagacgaccaccaagaccaaggctgacgactctgaattt
catcagtatcaggccctcaatctctgccccaattgcaaaaccgcctactacttccgaccc
caccagattgctcccctccagggcaccttcgtagagattgggagactcaccaacaccacc
accacctcgtccaatcgtaacgcctccagaaccaactccgacaacaagtcccattccaga
aatacccaaaatactaataatagtaatggaggaggaggaggaggaggtggtggtggagat
tcgatgcctaatattaacagtaatgggctgagggtgtctttctgggacactttgaggtca
tatgcgaatggggtggacccgccagacaactggcctccgccttctcctcctcctcctcct
ccaggcaatgggctagccgtgcatactcctccgggccctccttttgcccctggagtcaat
gtcattcgtgcttctgggccccctggagatgctgggggagacaacaacaatgcctggggc
gggtccaatttgggaaaagatttgcccacgcccaaggagatctgcaagggtcttgacaag
ttcgttattggccaacaaagagccaaaaaggtgctttctgtggctgtttataaccactac
aaaagaatatatcatgcctccttgcagaaagggtcaggaggagaatcaggaattccaaac
acaatagatgatgatgataaagtggagctagaaaagagcaatgtgctcttgatgggccca
actggatccgggaagacgttgcttgcaaaaacactagctcgttttgtgaatgtgccattt
gtgatttctgatgcaacaactttaacacaagctggttatgttggagaggatgttgaatca
atattgtacaaactactgatggcagctgaattcaatgtacaagcagctcaacaagggatt
gtttacattgatgaagttgacaagataaccaagaaggctgagagtttaaacattagcaga
gatgtttctggagagnnnnnnnnncagcaggctttattgaaaatgctcgaaggaactata
gtgaatgttcctgagaagggtgcaaggaagcaccctcggggtgataacatacagatagat
acaaaagatattctttttatttgtggtggagcgtttattgatcttgaaaaaaccatttca
gaaagacgacaagattcttctatcggtttcggtgctcctgttcgtgccaacatgagagct
ggtggtgtgactgatgcagtggtgacatcatctttacttgaatcggttgaaagttccgat
ctcattgcatatggactcataccagagtttattggacgttttccaatattagttagttta
acggccttaactgaggaccaacttgttcaggtcctcacggaaccaaaaaatgctcttggc
aagcagtacaagaaattatttacaatgaataacgtgaagctacattttgaggagaaggca
ctgagacttattgcaaagaaggcgatggctaagaataccggtgccaggggtttaagagca
cttttggaaagcattctaactgaagccatgtatgagattccagatgttaagacaggaatt
gatagaatagatgctgtagtggttgatgaagagtcagtgggttcggtaaatacccctgga
tgtggaggcaagcttgttcgaggggatggtgcattggaaagatacttgagtgaaatcaag
ttgaagcactcagtggaaaatgtagaggcggctgaaggggaagcagagggtgaatcagaa
caatcgtccagagctatgagcatgtaa
DBGET
integrated database retrieval system
