Prunus mume (Japanese apricot): 103331677
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Entry
103331677 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103331677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103331677
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103331677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
ATG17_like
COG3_N
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
103331677
NCBI-ProteinID:
XP_008232542
UniProt:
A0ABM0P0A7
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All DBs
Position
LG5:13992305..13997771
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AA seq
735 aa
AA seq
DB search
MSGFPFGSSSAASSQSTTPFSFTNPPASSPATSTGFLLGSSPSPFGSTAAHAATSTSGFS
FGTSFSASTSSNPSSSSSPFPFSINTTASPSAPASAPGFGSSNPSSGPAPSFGFGSGAST
ATAASSAAAPSFGFGSSAATSAPSSMFGSSASTPLFGSSPSQPLFGSSASAPASASASTL
FGAPSSTSSSLFGATVSAASSPLIGSASASTLFGAPSSTSSSLFGATVSAASSPLIGSAS
ASASSLFSSSSFTHSAPSSLFGSSSTVSSTPSFSSASSSSASTTPSFPSFSSSSSGFSFP
TASPLSKPPTTSTPTTVTPSATASTAPSFSFAPPTSSASQLSFGFSNASLSAAPISTAKP
TLQSFSTPSAPLFSTVTTTSASSTSAASTTSQASFSMPSFGATPTTSAVSSTVATASIAA
PASSAAPSSTAGLFTGFGVSSAAASLGTTTAAASYTGFSSLTKGSTPASSSQAQPSTTLP
AFGATTSALVAATTTSTSTTAIQTSTSLIVASTSGTTSTVSTTVSTAPKLPSEITGKTVE
EIIKEWNAELQERTGKFRKQANAIADWDKRILQNRDVLLRLEIEVAKVVETQANLERQLE
LIETHQQEVDKALQSMEEEAERIYKDERGLVLDDEAASTRDAMYEQAEFIERELEQVTEQ
IKSIIQTLNANQGGELDTNDGMAPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLANQG
PAADRELMSPKYWMS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcccattcggatcctcctccgccgcttcttctcagtccactacgcctttc
tcattcaccaaccctcctgcctcttcccccgccacctcaaccgggttcttactcgggtcc
tccccttccccattcggatccactgccgcacacgccgccacctccacctccgggttctca
tttggaacctccttcagtgcctccacttcctcaaacccttcctcctcctcatctcccttc
cccttctccattaacaccaccgcctccccctccgctcccgcctccgcccccggttttggg
tcctctaaccctagctccggcccggccccttctttcggattcggatccggagcctccacc
gccaccgcagcctcctctgctgccgccccttcttttggattcgggtcctcagcagcaacc
tcggctccatcatccatgtttggctcctcggcttcaactccgctgtttggttcatctcca
tcccaacccctgtttggctcatccgcatcggcgcccgcttccgcttccgcttctacttta
ttcggagcaccgtcgtccacctcttcgtccttgttcggggcaactgtatcggcagccagt
tcacccctgattggctccgcttccgcttctactttattcggagcaccgtcgtccacctct
tcgtccttgttcggggcaactgtatcggcagccagttcacccctgattggctccgcttcc
gcttctgcttcatctctgtttagctcatcttccttcacacacagcgcgccctcttccctg
tttggctcatcttccacagtttcttcaacaccctcgttcagctctgcttcgtcgtcttca
gcgtcaaccacaccctcattcccaagcttctcgagttcctcttcaggcttctcgttccca
accgcctcacctctttcaaagccaccaacaacctccacacccaccactgttactccatca
gcaacggcttcaaccgctccaagcttctcgttcgcaccacccacttcctctgcttcacaa
ctgtctttcggattctccaatgcctccttatcagctgcccccatttctaccgcaaagcct
accttgcagtccttctcaactccttctgccccgttgttttcgacagtcaccaccacaagc
gcttcttcgacttcagctgctagcactacatcccaagcctctttctctatgccaagtttc
ggtgcgactcctactacttctgcagtttcgagtacagttgcaacggcttcaatagcggcg
cctgccagctcagctgcgccttccagcacagcaggtttgtttacagggtttggagtgtcc
tccgcagctgcttctttagggactactactgctgctgcttcttatactggcttttcctcg
ctgacaaaagggtcgacgcctgcttcctcatcacaagcgcaaccaagcacgactttgcct
gcatttggtgccactacttcagcacttgtagctgcaacgacaaccagtacaagtaccact
gcaattcagacatcaacatcacttattgtggcttccactagtgggacaacttcaactgtc
agcactacagtatctactgcaccaaaattaccgtctgagatcacagggaagactgtggag
gagatcatcaaggagtggaatgctgagctccaagaacgtactggaaaattccgaaagcag
gccaatgcaatagcagactgggacaagagaattttgcagaaccgtgatgttcttcttaga
ctcgagattgaagtggcgaaagtggttgaaacccaagctaacttggagcggcagctagag
ttaattgagactcatcagcaagaggttgataaggctttgcaaagcatggaagaagaagct
gagcgtatatacaaggacgagcgtggattggttcttgatgatgaagctgcatcaacaaga
gatgctatgtatgagcaagctgagtttatagagagagaactggagcaggtgacagaacag
atcaaatcaattattcagaccctaaatgccaaccagggaggagaacttgatacaaatgat
gggatggctccattagatgtggttgtacgaatcttaaacaatcagctcagttctttaatg
tggattgatgaaaaggctgaagagttctcgtcgcgaattcagaagcttgccaatcaaggt
cctgctgcagatcgtgaattaatgagtccaaaatactggatgtcctga
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