Prunus mume (Japanese apricot): 103331937
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Entry
103331937 CDS
T03196
Name
(RefSeq) cysteine protease ATG4
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103331937
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmum01002
]
103331937
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103331937
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103331937
Peptidases and inhibitors [BR:
pmum01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103331937
Membrane trafficking [BR:
pmum04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103331937
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103331937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
103331937
NCBI-ProteinID:
XP_008232834
LinkDB
All DBs
Position
LG1:complement(14343342..14349701)
Genome browser
AA seq
487 aa
AA seq
DB search
MKGFCERAVASKYSSKSSTESTDRGPSSVCSDSGSRDSKHDKASLWSNFFASAFSIFETH
SESSNTEKKEIHSRNNGWTEAVRKVVTGGSMRRIHERVLGSSRTGISSASDIWLLGVRYK
VSQDEFSGDAATNNGLRAFEQDFSSRILMTYRKGFDAIGDSKYTSDVNWGCMLRSSQMLV
AQALLFHRLGRSWRRPLHKPLDEQYIEILHHFGDSEGSAFSIHNLLQSGKAYDLAAGSWV
GPYAMCRSWETLVRCKREGTAFDNQPLPMAVYIVSGDEDGERGGAPVVCIQDASRHCLEF
SRGRVDWTPILLLVPLVLGLEKVNPRYIPSLWATFTFPQSLGIMGGKPGASTYIIGVQDE
KALYLDPHEVQPAINIRRDDLEADTLSYHCNVIRHIPLDSIDPSLAIGFYCRDRDDFDDF
CFRASKLADGSNGAPLFTVTETHNFPKPVNHSDVLDDSGGVQNDDSFVAPPISDADGSAH
EDDWQLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtttttgtgagagggctgttgcgtcgaaatattcctctaaaagttcaacagaa
tcgacagatagaggtccgtcatctgtttgttcagattcaggatctagggacagtaagcac
gacaaggcgtccctgtggtcaaacttctttgcatctgctttctcaatctttgaaacacat
agtgagtcatcaaatactgaaaagaaggaaattcattctagaaacaatggatggacagaa
gctgtgaggaaagttgtgactggtggctctatgaggaggattcacgagcgtgtacttgga
tccagcagaactggcatctcttctgctagtgacatatggcttcttggtgtgcgctacaaa
gtctcacaagatgagttctctggagacgcagctaccaacaatggattaagagcatttgaa
caggatttctcatcaagaattttgatgacatatcgtaaaggttttgatgctattggagat
tcaaagtatactagtgacgtaaattggggctgcatgcttcggagtagtcagatgcttgta
gcccaggcattgcttttccatagattgggaagatcttggagaagacccttgcacaagcct
ttagatgaacaatatattgagatcctgcatcattttggtgattccgaaggatcagctttc
tctatccacaatcttcttcagtctggaaaggcttatgacctcgctgccgggtcatgggtt
ggcccatatgccatgtgccgctcatgggagactctagttcggtgtaagagagaaggaact
gcctttgataaccagccacttccaatggctgtttatattgtatctggggatgaagatggg
gaacggggtggagccccagttgtctgcattcaagatgcctctagacattgtttggagttt
tcaagaggtcgggttgattggacgcctattcttttactggttcctttggttcttggactt
gaaaaagtcaaccccaggtacattccatcattgtgggcgacattcacttttccccaaagt
cttggcatcatgggtggaaaacctggtgcatcaacttacattataggtgtgcaagatgaa
aaagcactttaccttgatccgcatgaagttcagccggcaatcaatataagacgggatgat
ttagaggctgatactttatcttaccactgcaatgttatacggcacattccccttgattct
attgatccatctttggcgataggattttattgccgtgacagagatgattttgatgatttt
tgttttcgagcttccaagctggcagatggatcaaatggtgctccgctgttcactgtgact
gagacgcataattttcccaagccggttaaccacagtgatgttttggatgatagtggtggg
gttcaaaatgatgattcatttgtggccccgcccataagtgatgcagacggaagtgcacat
gaagatgactggcaactcctatga
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integrated database retrieval system
