Prunus mume (Japanese apricot): 103331973
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Entry
103331973 CDS
T03196
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103331973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103331973
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
SR proteins
103331973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
DbpA
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103331973
NCBI-ProteinID:
XP_008232878
LinkDB
All DBs
Position
LG5:16321520..16325867
Genome browser
AA seq
326 aa
AA seq
DB search
MRPIFCGNLDFDARQGDVERLFRRYGKVERVDVKSGFAFVYMDDERDAEYAIRRLDRTEF
GRKGRRLRIEWTKHERGIRKPVDSRRPSANTKPSKTLFVINFDPIHTRTRDLERHFDPYG
KIVNIRIRRNFAFIQYESQEDATKALEATNSSKFMDRVISVEYAVRDDDDRRNGHSPDRR
GRDMSPERRSNDRGRSPSPYRRDRASPDYGHGSRISSRSDPRRSPDYERAESPINDRSRP
SSRPEPRRSPSYERAASPVNDRSRPSSRREPRRSPSYERAASPVNDRSRPSSKPEPRRSP
SYERAASPVNDRYRSRSPPPRERSRS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaatattttgcggcaacttggattttgatgcacggcaaggggatgttgagcgg
cttttcaggagatatgggaaagttgagagggtggatgttaagtctggatttgcttttgtc
tatatggatgatgaacgagatgctgagtatgccattcggagacttgacaggacagaattt
ggtaggaagggacgccgacttcgtattgagtggaccaagcatgaaagagggattaggaaa
cctgttgattcaagaagaccttcagcgaacacgaagccctcgaaaaccttgtttgttatc
aattttgatccaatccataccaggacaagggatctggagaggcactttgatccatacgga
aaaatagtgaacataaggattagaaggaattttgcattcattcaatatgaatcacaggaa
gatgctaccaaagcattggaagcaacaaattcaagcaagttcatggacagggttatttct
gtggaatatgctgttcgtgatgatgatgatagaagaaatggacacagtcctgatagaagg
ggccgtgacatgtctcctgaaagaagaagcaatgatcgtgggcgatctccaagtccatac
cgcagagatagggctagccctgattatggccatggctcccgtataagttctagatctgat
ccaagaagaagtcctgattatgagagagctgaaagcccaatcaatgatagatcccgtcct
agttctagacctgaaccaaggaggagtcccagttatgagagggctgctagcccagtcaat
gatagatcccgtccaagttctagacgtgaaccaagaagaagtcccagttacgagagagct
gcaagcccagtcaatgatagatcccgtccaagttctaaacctgaaccaagaagaagtccc
agttatgagagagctgcaagcccagttaatgatagataccgcagccgttcacccccaccg
cgggaaagatcccgttcctga
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integrated database retrieval system
