Prunus mume (Japanese apricot): 103331992
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Entry
103331992 CDS
T03196
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103331992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103331992
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103331992
Membrane trafficking [BR:
pmum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103331992
Atg1 complex
103331992
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103331992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103331992
NCBI-ProteinID:
XP_008232909
LinkDB
All DBs
Position
LG1:complement(14402098..14406945)
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AA seq
634 aa
AA seq
DB search
MASSHGNSHSEAAKMEQIITEFYAKSLHIVLESRTPYMSSRNYSGEQALSSPSSSSSSSS
SVRPRDKWFNLALRECPAALENLDLWRQSHLEPMVVDVILVQRPLDCEPVKCSPKRDLVR
NLSLKERYPYCWNYEQEEYGCEAKSEKIIERWVVQYDSRKIRDTNSGSRRSSSNTLHSLY
KKSMLLLRSLYVTVRLLPAYKVYRNLNSSGQIRSFSLTHRVASFAEPFTCREEAAMQRFG
FTPVDTACGRLCLSVLYCSSLSDVSSESSTPMSPQLIPDYVGSPLTDPLKRFPSLPVTGS
VAHAFPPSSSFSRRHSWSFDHYRASPPSVSFSPSPTYSEPHALISNQSSRFPPTIMPPYP
SETSLVYKKDTSFDEYSPAFSPSPSSASPSLPIFIPGSHHSKPLLQSESAPFSERTAKLA
NSPAFRNKLNMPLRGFGSGSSKTDKTRGFMEAGTAVEKFSSLGKDDARQYSEVKISSSSS
SRSFPDDLDDSDFPCPFDVDDEDVTDPGSRPESFDKNVPLREPHVPGGLFPMKKSQDAAV
GALVQMFRKAPPLRQDNSNSVKFSQACRPEIWSNSSQEPHQPSKGQASIQCDDSSSVISS
GRITSKTTTVALEELQSYREMKNLLLGQGSKSHM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctcatggtaattcccactctgaagcagcaaaaatggaacaaataatcact
gaattctatgccaaaagtctccacatcgtccttgaatctaggactccatacatgtcctca
cgtaattatagtggtgaacaagccctatcgtcgccatcatcatcctcatcatcctcatca
agtgtgaggccgagggataagtggtttaatttagctctaagggaatgtcctgctgcactg
gagaatcttgatctctggcgccagagccatcttgaacctatggtggttgatgtgattttg
gtccagagaccacttgattgtgagcccgtgaagtgttcacctaaaagggatcttgttagg
aacttgtcattgaaagagcggtatccatactgttggaattatgagcaggaggaatatggg
tgtgaggcaaagagtgaaaagattatagagagatgggtagtgcagtatgacagtcggaag
attagagatacaaattcagggagcaggaggtcgagcagtaatactttacattcattgtat
aagaagtcgatgttacttttgaggtctttgtatgtcactgttaggcttttacctgcttac
aaagtttatcgcaacctcaattcgtctggccaaattcggtcattttctcttactcaccga
gtagcctcttttgctgagcccttcacttgtagagaagaggcagcaatgcagcggtttggg
ttcacccctgtggatacggcttgtggtaggctttgcctttcagtgttgtattgttcatca
ctttcagatgtaagctctgaatcatcaactcctatgtctccacaacttattccggactat
gttggcagcccattgacagatccacttaaaaggttcccatcacttcctgtgacaggatca
gtagcacatgcctttccaccatcttcctcattctcaaggcgacatagttggagttttgac
cattatagagcttcaccaccttcagtttccttctcaccttcacctacatattcagaacca
catgctttaatttctaaccaaagttctcgttttccacctacaatcatgccaccttatcca
tctgaaacatctcttgtttataagaaggatacaagctttgatgagtattcacctgccttt
tcaccctcaccatcgtctgcctctccatcattgccaatctttattcctgggagtcatcat
tcaaagcctcttttacaatctgagagcgcaccattcagtgaacggacggctaaacttgct
aattcccctgcattccgcaacaagctaaatatgcctcttagaggttttggatctggcagt
tctaagactgataaaactaggggttttatggaggctggtacagcggttgagaagttttcc
tccctcgggaaagatgatgctagacaatattctgaggttaaaatatcatccagcagctcc
agtaggtctttccctgatgatttggatgattctgactttccttgcccgtttgatgtggat
gatgaggatgtgacagatccaggtagcagacctgaatcttttgacaaaaatgtacctctg
cgtgagccacatgtgcctggagggttgtttccaatgaaaaaatcccaagatgctgctgtt
ggtgcccttgtacaaatgtttagaaaagctccacctctccgccaggataactcaaattct
gtaaaattttcacaggcctgcaggcccgaaatctggagcaacagtagccaagagcctcat
cagccttctaagggacaggcatcaattcagtgtgatgattcttcaagcgtcatttcctcg
gggcgcattacatcaaaaactaccactgttgcattagaagaactccaaagttacagggag
atgaaaaatttgttactagggcaaggtagtaagtctcacatgtag
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