Prunus mume (Japanese apricot): 103332106
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Entry
103332106 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103332106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103332106
03036 Chromosome and associated proteins [BR:
pmum03036
]
103332106
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103332106
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103332106
Chromatin remodeling factors
BAF complex
103332106
PBAF complex
103332106
GBAF(ncBAF) complex
103332106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
103332106
NCBI-ProteinID:
XP_008233027
LinkDB
All DBs
Position
LG5:complement(17228152..17239239)
Genome browser
AA seq
2254 aa
AA seq
DB search
MQSGGGGGGGPSRNPGVGPAGRAGSTSSAASPSSSSSAVSTPHLGFDSVQHQHQHQQQQQ
QQQQQQLGSRQSLQQQQFLRKPEGNEALLAYQAAGLQGVLGGSNFVSSPGSSQMPQQSRK
FIDLAQQHGSQDGQNRSQGVDQQVLNPVHQAYLHYAFQAAQQKSGLAMQSQQQAKMGLLG
PPSGKDQDMRLGNMKMQELMSMQAANQAQASSSKNSTEHFTRGEKQMDQAQPPSDQRSES
KPSAQQSGIGQFMPGNMLRPMLAPQAQQSTQNTPNNQIALAAQLQAFALEHNIDLSQPGN
ANLMAQLIPLLQSRMAAQQKANESNMGVQSSPVPVSKPQVTSPPVASESSPHANSSSDVS
GQSSSAKAKQTVAPSPFGSGSNTSIFNNSNSIPVKQFAVHGRENQMPPRQSVPIGNGMTS
IHPTQSSANTSQGVDHXKQLSRSSPQAVVPNDGGSGNHIQTQGGPSTQMPQQRLGFTKQQ
LHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLDLQLQQQLLPGGGNIQDKSSGKVIED
HVRHVESNEKDSQAVASINAQNVPKEEAFTGDEKATVSTVHVQGTPTALKEPTPVVSSGK
EEQHSTLSSVKLDHEVERSIQKAPVRSEFPVDRGKSVASQVAVSDAMQVKKPAQASTVPQ
PKDVSSARKYHGPLFDFPFFTRKHDSFGSGVMVNNNNTNSNNNNLTLAYDVKDLLFEEGV
EVLNKKRTENIKKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQ
EIMAMPDRPYRKFVRLCERQRMELARQVQASQKAMREKQLKSIFQWRKKLLEAHWAIRDA
RTARNRGVAKYHERMLREFSKRKDDDRSKRMEALKNNDVERYREILLEQQTSIPGDAAER
YAVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAANAAAASARVQGLSEEEVRAAAACAG
EEVLIRNRFIEMNAPRDSSSVNKYYSLAHAVNERVIRQPSMLRTGNLRDYQLVGLQWMLS
LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLP
SVSCIYYVGGKDQRSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRM
KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPF
QKEAPTPNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGALPPKISIVLRCRMSA
IQSAVYDWIKSTGTIRVDPEEEKLRVQKNPLYQPKVYKTLNNRCMELRKTCNHPLLNYPY
FNDFSKDFLIRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRI
DGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA
VARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDSEDDLAGKDRYIGSIESLI
RNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLQEVNRM
IARSEEEVELFDQMDEELDWIEEMTKYNQVPKWLRTGTREVNAVVASLSKRPSKNTLLGG
NIGLETSEMGSDSSPKTERKRGRPKGKKHPSYKELDDDNGEYSEASSDERNEYSLHEEEG
EVGELEDDEYSGAVEATPIIKEQVEEDGPECDVGYDYPQASERVRNNHMLEEAGSSGSSS
DSRRLMQTVSPVSSQKFGSLSAIDGRPGSVSKRLPDDVEEGEIVVSGDSHMDHQQSGSWN
HDRDEGEDEQVLQPKIKRKRSLRVRPRHTVERPEEKSGSETPSLQRGDSSLLPFQADHKS
QTQSRADSEIKTYGDPHALKHDQSDSSSKTRRSLPARRIGNASKLHASPKSGRSNSVPDP
AEDAAEHHRENWDGKVGSTSGTPVYGTKMPDIIQRRCKNVISKLQRRIDKEGPQIVPLLT
DLWKRIENAGCASGSGNNILDLRKIDQRIERLEYNGVMELVFDVQSMLKSAMQFYGFSHE
VRTEARKVHDLFFDILKIAFADTDFREARSALSFTSPVSTTNAPSPRPVTVGQSKRHRHI
NEVEPDPGPQQKPQQRTPIFSGEDTRMRSHMPHKESRLGSGSGNSREHYQQDDSPQLAHP
GDLVICKKKRKDREKSVVKPRTGSAGPVSPPSMGRSIRSPGSNSVPKERLTQQTSQGWTN
QPAQPSNKAAGSVGWANPVKRLRTDSGKRRPSHL
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggcggaggtggaggcgggcccagccggaacccgggagtgggccccgcg
ggtcgggctggatcgacatcgtcggctgcttcaccatcttcgtcgtcctctgccgtgtct
acgccacacttgggtttcgattctgtgcagcatcaacatcaacatcagcagcagcagcaa
cagcagcagcagcagcaattagggtctaggcagtcattacaacagcaacaatttttaaga
aaacctgaagggaatgaagctcttctagcatatcaagctgctggtctccaaggagttctg
ggagggagcaattttgtttcatctcctggctccagtcaaatgcctcaacaatctaggaag
ttcattgatttggctcaacaacatggctcccaggatggacagaataggagtcaaggtgtt
gaccagcaagtgttaaatccagttcatcaagcttatcttcattatgcttttcaggctgcc
cagcagaagtcaggtttggcaatgcaatctcagcagcaagctaaaatgggattgttgggg
cctccatctggaaaggaccaggacatgcgattgggaaatatgaaaatgcaggaactcatg
tctatgcaggcagctaatcaggcacaagcatcatcgtctaagaactcgacggaacatttt
actcgtggagaaaagcagatggaccaagcacagccaccctctgaccaaaggagtgaatca
aagccttcagcccagcagtcaggcataggtcaattcatgcctggaaatatgttaaggcca
atgctggcgccacaggctcagcaaagcacccaaaacacgccgaacaaccagattgcattg
gctgctcagttgcaagcatttgcacttgagcacaacattgatctttcacagcctggaaat
gccaacttgatggcgcagctcattccattgttgcaatctaggatggctgctcaacaaaag
gcaaatgaaagcaacatgggtgtacaatcatcacctgttccagtgtcaaagccgcaggtt
acttctccaccagttgcgagtgagagttctccgcatgctaattcatcaagcgatgtatct
ggacagtctagctctgcaaaagcaaagcagacggttgctcctagcccttttggttcaggt
tcaaatactagcatctttaacaatagtaacagcattcctgtgaagcagtttgctgttcat
ggcagagaaaaccagatgcctcctaggcagtcggttcctattggaaatggaatgacttct
atccaccccacacagtcatctgcaaacacaagccagggtgtggatcactagaagcagttg
agtcgatcttctccacaggctgtagttcctaatgatgggggctctggcaaccacatacag
acacaaggtggaccgtctactcagatgccacaacaacgtcttgggttcaccaaacagcag
cttcatgttcttaaagctcaaatactagcatttaggcgactcaagaaaggtgaaggcaca
ctcccacaagaacttcttcgggctattgctccaccaccacttgatctgcagctacagcaa
caattgcttcctggaggaggaaacattcaggataaatcttctgggaaagttatagaagat
catgtgcggcatgtggagtccaatgaaaaagattcacaggctgtggcatcaataaatgca
cagaacgttccaaaagaggaagcttttactggagatgagaaagcaactgtatcaacagtt
catgtgcaaggaacgcccactgcgttgaaggaacctactcccgtggtgtcttctggaaaa
gaagagcagcattccactttatcttctgttaagttggaccatgaagttgaacgcagtatt
caaaaagctcctgttagaagtgagtttccagttgataggggaaagtctgttgcatcacag
gttgctgtatctgatgccatgcaagttaagaagcctgcgcaagcaagcactgtaccccag
ccaaaagatgttagctcagctagaaagtatcacggaccactgtttgatttcccctttttc
actaggaaacatgactcttttggttcaggagtgatggtgaacaacaacaatactaacagc
aataataataatctaacattggcatatgatgtcaaagatcttctgtttgaggaaggtgtg
gaagtccttaacaagaagagaacagaaaatattaagaagattggtggtctattggcggta
aatttggagaggaaaaggattaggcctgatcttgtcttgcggttgcaaattgaagaaaaa
aagcttcgacttttagatttacaggcacgcttaagagatgaaattgatcaacaacagcag
gagataatggcaatgcctgacaggccttataggaagtttgttcggctttgtgagcgtcag
cggatggagctagctaggcaagtgcaggcctctcagaaagccatgagggagaagcaactg
aaatctattttccagtggcgtaagaagctacttgaagcacactgggccattcgtgatgca
cggactgcacgcaacaggggagttgccaaatatcatgagagaatgttgagggagttttca
aaaagaaaggatgatgataggagtaaaaggatggaagcattgaagaataatgatgttgaa
aggtacagggaaattttgctagaacagcagactagtatcccaggggatgcagcagagaga
tatgcggttctatcatcatttttgagtcagactgaggaatatcttcataagcttggaagt
aaaataacagctgccaagaatcaacaggaagtggaagaggcagcaaatgctgctgcagct
tctgcacgggtgcagggtctctctgaggaagaagttagggcggcagcagcttgtgctgga
gaggaagtactgattagaaatcgatttatagaaatgaatgcacctagagatagttcatct
gttaacaagtattatagtcttgcacatgctgtgaatgaaagggtcataaggcaaccctca
atgttacggactggaaacttaagagactatcaacttgttgggttgcaatggatgctttct
ctgtataacaacaagttaaatggaatattagcagatgaaatgggtcttgggaaaactgta
caggtgatggcattgattgcatatttaatggagttcaaaggaaactatgggccgcatctc
ataattgttcccaatgctgttttggtaaattggaagagtgagttgcatacttggcttcca
tctgtgtcatgcatatattatgttggtgggaaggatcaacgatcaaaattattttctcaa
gaggtttgtgccttgaagtttaatgtccttgtgacaacttatgagttcatcatgtatgat
cgctccaaactttcaaaaattgattggaagtatataataattgatgaagcacaaaggatg
aaagacagggagtcggttctagctcgtgaccttgacaggtatcgttgccaaaggcgcttg
cttttgacgggaacaccattacagaatgatttgaaggaactctggtcactattaaatttg
cttcttccagaagtatttgataatcggaaagcatttcatgactggttttcgaaacccttt
caaaaggaagctcctacaccaaatgcagaagatgactggcttgagactgaaaagaaagtt
atcatcatccaccgacttcatcaaattttagaaccttttatgcttaggcgtcgtgttgaa
gacgtggaaggtgcacttccacccaagatctccatagttttaaggtgtagaatgtcggct
attcaaagtgctgtatatgactggatcaaatcaacaggcactattcgcgtagatcctgaa
gaagagaagctcagggttcaaaagaatccactttatcagcccaaagtgtacaaaacctta
aataacagatgtatggaactgcgaaaaacttgcaatcatcctttgcttaattatccatat
ttcaatgatttttccaaggatttccttataagatcctgtgggaaattatggatcctggat
aggatccttattaaacttcagagaacagggcatcgagtacttctttttagtaccatgaca
aaactccttgatattttggaggaatacttgcagtggcgtcgacttgtctacagaagaatt
gatggaacaaccagtttagaagatcgtgagtcagctatagtggatttcaacagccctgat
tcggactgcttcatcttcttgcttagtattcgtgcagctggtcggggtcttaatctccag
tctgctgatacggttgtcatatatgatcctgatccaaaccctaaaaatgaagaacaggca
gttgctagagcccaccgcattggacagaagagagaagtcaaggtcatttatatggaagca
gttgttgacaaaatctctagccatcagaaggaggatgaactaagaagtggaggtactgtt
gattcagaggatgaccttgctggtaaggatcggtatatcggatcaattgagagcctcata
agaaacaacattcaacaatacaagattgacatggctgatgaggttatcaatgccgggcgt
tttgaccaaagaaccacacatgaagagcgacgtatgactctggaaaccttactgcatgat
gaagagaggtaccaagaaactcttcatgatgttccctctttacaggaggtaaatcgcatg
attgctagaagcgaagaagaagttgaattgtttgatcaaatggatgaagaactggactgg
attgaagagatgactaagtacaaccaggttcccaaatggcttcgaaccggtacaagagaa
gtaaatgctgtggttgctagtttatcaaaaagaccatctaagaacactttgttgggtggt
aatattggcttggagaccagtgaaatgggttctgattcatctccaaaaactgaaagaaag
agggggcggcccaaggggaaaaagcatcccagctataaggagttagatgatgacaatggt
gaatactcagaagcaagttctgatgagagaaatgaatattctttgcatgaagaagaggga
gaagttggagaattagaggatgatgaatatagtggtgctgttgaggcaacaccaattatt
aaggaacaagtggaagaagatggccctgaatgtgatgttggctacgattatccccaggct
tcagaaagagttagaaataaccacatgctagaagaagctggttcctcaggatcatcctca
gacagtcggaggttgatgcagacagtgtctcctgtttcttcccagaaatttggttccctg
tctgccatagatggtaggccaggatctgtttcaaagaggctgcctgatgatgtagaggaa
ggtgagattgtcgtatctggggattctcatatggaccaccaacaatctggaagttggaat
catgaccgtgatgaaggtgaagacgaacaggttttgcaacctaagatcaagaggaagcgt
agtcttagggttcgccctcgtcataccgtggaaaggccagaggagaaatctggtagtgag
acgccatctctccaacgtggagattcatctctgttgcccttccaagcagaccataaatct
caaacacagtcaagagctgattctgaaatcaaaacgtatggagatccccatgctttaaaa
catgaccaaagtgattcatcctcaaaaactaggcgaagtttgcctgcaaggagaattggt
aatgcgtcaaaattgcatgcttcacccaaatctggcagatcaaatagcgtgcctgatcct
gcagaagatgctgctgaacaccacagagaaaattgggatggaaaagtcgggagtacgagt
ggaactccagtttatggcacaaaaatgcctgacatcatccagagaaggtgcaagaatgta
attagcaagctccaaaggagaatagataaggaaggtcctcaaatagtacctttactaaca
gatttgtggaagcgcattgaaaatgctggttgcgcaagtggatctggaaataatatcttg
gatttacgaaagattgatcagcggatagagaggttggagtataatggagtgatggagctt
gtgtttgacgtgcagtctatgttgaaaagtgcaatgcaattttatggtttttcccatgag
gtaagaactgaagccaggaaagtacatgatcttttctttgatatcttgaaaatagcattt
gcggacactgattttcgagaagccagaagtgcactctcctttactagcccagtttcgacc
actaatgctccatccccaagaccggtgactgttggccaaagcaagagacacagacatata
aatgaggtggagcctgaccctggtcctcaacagaagccacaacaacgtactcctattttc
agtggcgaagacacgaggatgagaagccatatgccccacaaggaatcaagacttgggagt
ggaagtggtaatagtcgggagcactatcagcaggatgattctccacagcttgctcatcca
ggggatctggttatctgcaagaagaagagaaaagacagggaaaagtccgtggtaaagcct
aggactggatcagctggccctgtttcacccccgagtatgggtcgcagtattagaagtcca
ggttcaaattcggttccaaaggagagattgactcaacaaacctcgcaagggtggaccaac
cagcctgctcagccttcgaataaggctgcagggtcagttggttgggcaaatcccgtaaag
aggttacggacagactctggaaagagaaggccaagccatttatga
DBGET
integrated database retrieval system
