Prunus mume (Japanese apricot): 103332171
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Entry
103332171 CDS
T03196
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103332171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103332171
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
SR proteins
103332171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
SET_assoc
Nup35_RRM_2
RRM_5
RRM_fung
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103332171
NCBI-ProteinID:
XP_008233099
LinkDB
All DBs
Position
LG5:17630326..17633118
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AA seq
252 aa
AA seq
DB search
MRPVFVGNFEYETRQSELERLFSKHGRVDRVDMKSGFAFVYFEDERDAEDAIQNLDNKPF
GYDRRRLSVEWAKGERGRHHDGSKSVANQRPTKTLFVINFDPLRTKVRDIERHFEPYGKV
LHVRIRRNFAFVQFDTQEEATKALEATHASKILDRVVSVEYALRDDGERGDRYHDSPKRG
SYGRRGDSPFGRSPSPVYRRRPSPDYGRPRSPAYDRYNGPVYDRHRSPDYGRNESPEYGR
YRSRSPVRRSRT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggttttcgtcggaaacttcgagtacgaaactcggcaatcggagctggaacgc
ttgttctccaaacacgggagggtcgatcgtgtggacatgaagtctggttttgcctttgtc
tattttgaggatgagcgggatgctgaagatgctatccagaacctcgacaataagccattt
ggttatgacaggcgcaggctatctgtggagtgggctaagggtgaacgtggtcgccatcat
gatggttctaaatcagtagcaaaccagaggccaactaaaactttgtttgtcattaacttt
gatcccctccgaaccaaggttcgtgatatcgaaagacactttgaaccttatgggaaggtg
cttcatgtcagaattcgtcggaactttgcatttgtgcaatttgacacacaggaagaagct
accaaagctcttgaggctactcacgcaagcaagatactggacagggttgtgtctgttgag
tatgctttgagggatgacggtgagagaggtgatcgatatcatgatagtcccaaaagaggc
agttatggtaggcgtggagatagtccttttgggaggtcaccaagtcctgtgtatcgcagg
cgtccaagtcctgattatggtcggccccgtagtccagcatatgacaggtacaacggtcca
gtgtatgacaggcacaggagtcctgattacggaaggaatgagagtcctgaatatggcaga
taccgcagtcgctcgcctgttcgaagatcaagaacctga
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