Prunus mume (Japanese apricot): 103332187
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Entry
103332187 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103332187
KO
K24155
rabconnectin-3a
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103332187
Membrane trafficking [BR:
pmum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103332187
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
103332187
RAVE complex
103332187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
103332187
NCBI-ProteinID:
XP_008233121
LinkDB
All DBs
Position
LG5:17746450..17760704
Genome browser
AA seq
2544 aa
AA seq
DB search
MPDVDLPSAVDPTHHLPLQFLPSDPTPPAPTRSDPPGCTLDWLPDFLDLSWVAYGASSLL
VISHFPSPLSDAETVIGPIFRQIFELSGDPSSAVEAVSWSPSTPSIGELAAAAENCVWVF
SHDSARSKGSFCWSQNAVLVHSTKVEAMRWTGSGDGIIAGGIDVVLWKRNGRSWEIAWKF
KADMPQSMVSATWSVEGPFATAAYQTEGLLTSKASKCVLVCQSVGKSGFLKSELHHPHPI
SMIQWRPLTGSLNRDAKHPPRQVLLTCSADGTARLWCEVDDGRGRKVGKDVNDHKTMRCS
FSVAAVIEINQALNGILGTDIYLMWATEIGGVHKTSEGAKQIFFGKGYEQDQPGNCEWLI
GSGPGMLVNFWAIHCLDDVSPIRFPRVTLWKTQKLQGLKGGLSNYKDGIPLNKVVISRNC
SSGPPTLCSFVQLLPCNSLVWSQLYTQTSNNAEDISLNKSGTENILACSAGGLLNLDGHA
GRILQVAVHPYSCEVELAVSLDSCGLLLFWFFSTISNCILGRPTLIPTWELCGKLETQGS
CSKYTSLRWAPSIVNEAVVLLMGHAGGVDCFVVKFHHNEEESIECHYLCTIPFTGHGPYE
NGPTSIFSIPLPSTCHKTLKSNKFMLLGVWMNGFQALSWEIILHSFDLSRSYCECQFDAG
SAPEGSMWRFETTFANERYCLNVKPCSSKIPDPHTHDDVSSFAVVCPGRLICVEKSLAST
IDRCCPPYILATGCSDGSLKLWRSNMDKPSTPQISWELVGMLVAHQGPISSICLSDCGRK
IATICKELLSNTVSTLRIWDPVLLADAGTFMLEDTLSFGQDPVALNWLYCGNGQLLLGAC
TQNQLQVYSQQRCGGQTLLNSGKLLKKDIWVCIASTRTFPPIYDFFWGPRATAIFVHNSY
FCVNSQWLFPINKKHLANADPNCPDYLGRMEEDIDSTVFIDCGLDQFKKILLGDSRRDCK
SGIPLEIDLKKDYLSSSLFLARAQLKCGSATKLGLWNMDEVIEKLNGSLPVYHPEALFMN
IYSGNWKRAYTALRHLNEFLSSNSSPERKYSPAKYSICVPQIPLSSFFDARISVYSNDRG
FQWSGDASLVTSSSQFQRNLDQFTYSLDSYASSNQLNSSSTKTELSDFVEPLENLYKSAA
ISDMEKIQILSIIDLLIEMTNSHSGSAYESLDEPGRRFWVALRFQQLHSFRQHGRLASVE
ELVVDSKLIGWAYHSDCQENLFGSFLPNDPSWPEMRNLGIGFWFTNTAQLRSRMEKLARL
QYLKRKDPKDCALLYIALNRIQVLSSLFKISKDEKDKPLVGFLSRNFQEEKNKAAALKNA
YVLMGRHQLELAIAFFLLGGDTSSAVNICAKNLGDEQLALVICRLVEGRGGPLERHLITK
FMLPFAIEKDDYWLASLLEWELGNYSQSLIRMLGFQINSATEKHALSSNGVAFSDPNVGL
YCLMLATNNCMRNAVGERNIAILSRWAILTTATALNRCGLPLEALEYLSSLPTIRGDTDE
RGMSDLGHSENLHAILNPSSINSFNWLSSYVAFDLEFQGKLDLTLQYLSKLVREHPSWVD
IAFGSSEASTCVKEYENHEYLKVRESFQQKLYMAVHLFEQKFSVVPFHLISLILILLQDH
GLWFVGFDILHGYTSQHQEIDKTQTVDRFLSYALMHKPLLKATRETSLLFSRVIAACGIT
CSILKSHYIENNVSGDSRSMRSDSLGYYFQGLTLSLQSLRAALRFAFFSSTEDLTMKPLA
VIDLIEYYVQLACAWHRKNSKVLLLLVQPLVITFTNGHTPYEVDMMTLKKLLPQIREVVA
QNVSTDSVGLQVSQDRNITHSIPEDERWQIIGACLWQHISRLMKHKLNLLSYKLDDGCFS
GIPDRKHFSRLPSSASLQSDSNSINELIELVSLSLLKLLKPTLAHVSSYYVKQLASLLQH
KMDYGLHVRTLVWLEESNQSQTRALNQHLNQDIVKLDTIDERHESDMLWVTCADPKMISE
SFAEEKINWPHSLDRKPSKGWSNICRGITTVDETEEIPNHEVSLNSSSASTEAGSPAKSI
FRGGHSFLGTWQKDTTLTKEVTHFLNPKEIYKRNGELLEALCLNSIDQGQAALASNRKGI
LFFNWKDDMSFGDHSDDIWSEADWPLNGWAGSESTPAPTCVSPGVGLGSKKGAHLGLGGA
TVGVGSLTRPGRDLTGGGAFGIPGYAGIGASGLGWETQEDFEELVDPPATVENANTRAFS
SHPSRPFFLVGSSNTHIYLWEFGKDKTTATYGVLPAANVPPPYALASISALQFDHCGHRF
ATAALDGTVCTWQLEVGGRSNIGPTESSLCFNSHASDVAYVTSSGSIIAVAGFSSNNVNV
VIWDTLAPPTTSRASILCHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVGLHDFRYIA
TGRSKRHRHSDKGEQVMKTSSNIDMHPGNGTKLGEQNQNGMLWYIPKAHSGSVTKISIIP
NTSLFLTGSKDGDVKLWDAKRAKLVYHWPNLHERHTFLQPSTRGFGGVVQAAVTDIKVVS
HGFLSCGGDGTVKLVQLKDHQHQT
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtagacctaccatcggctgtggaccccactcaccaccttcctctccaattc
cttccatccgacccaactcctcccgccccgacccgatccgatccacccggatgcaccctc
gactggctgccggactttctagacctctcatgggtcgcctacggagcctcctcgctccta
gtgatctcccacttcccctccccactctccgatgccgaaactgtaataggacccattttc
cgtcaaatcttcgagctctccggcgacccctcgtcggcagtcgaagccgtctcttggtcc
ccgtccacgccctcgatcggtgagctagctgccgcggctgagaattgcgtttgggtgttc
tcgcatgattcggccaggtccaaaggttctttttgttggagccagaatgcagtactcgta
cattctacaaaggtcgaggcaatgagatggactggctcaggggatggaattattgccggt
ggaattgatgtggttttgtggaaaagaaatggcaggtcttgggaaattgcttggaagttt
aaagcagacatgccacaaagtatggtctctgcaacttggtctgttgaaggaccttttgca
actgcagcttatcagactgaaggattgttgaccagtaaggctagcaaatgtgtgctagta
tgccaaagtgttggaaaatctggttttttgaaatccgagctacatcatcctcatcctatc
tcaatgattcagtggaggccattaacaggaagtttaaatagagatgcaaaacatccaccg
aggcaagtgttactcacatgtagcgcagatggaactgcaaggttatggtgcgaggttgat
gatggaaggggaagaaaagttggtaaggacgttaatgaccacaaaacaatgaggtgttca
ttttctgtagccgctgtaattgagataaatcaggcactgaatgggattctaggcactgat
atatatctgatgtgggccacagaaattgggggtgtacataaaactagtgagggagctaaa
caaattttctttggaaaaggttatgagcaagatcaacctggtaactgtgagtggttaatt
gggtctggccctggaatgttggtcaatttctgggctatacactgtcttgatgatgtctcc
ccaataagatttccgcgggtcaccttatggaagacacaaaaactacaagggctaaaaggg
ggactttctaattataaagatggaatacctcttaataaagttgttatctcgaggaactgc
tcgtctggtccaccaacattatgttcttttgttcagttattaccttgtaattccttggtt
tggtcacaattatatactcaaacttcaaataatgccgaggatatatcccttaataaatct
ggtactgagaacatcttagcatgttcagctggtggactcttgaatttggatggtcatgct
ggaagaatcttacaagtagctgtgcatccttatagctgcgaagttgaattggctgtctct
ctagattcttgtggactacttctattttggtttttttctaccatttccaactgcattttg
ggccgtccaacactaattccaacatgggagctttgtgggaaacttgaaacacaaggatca
tgttccaaatatacaagcttgaggtgggcaccgtcaatagtaaatgaagcagttgttctt
cttatgggacatgctggaggcgttgattgctttgttgtaaaattccatcataatgaggaa
gaaagtatagaatgtcactacttatgcacaataccttttacaggtcatggtccgtatgag
aatggtcccactagtatcttttcaattcctttgccttcgacttgtcataaaaccctaaaa
tctaataaatttatgcttttgggtgtatggatgaatgggtttcaggctctttcttgggaa
atcatcttgcattcttttgatttatcaagaagctactgtgagtgtcaatttgatgctgga
agtgctcctgaaggcagtatgtggcgatttgaaactacttttgccaatgaaagatattgt
cttaatgtaaaaccttgctcgtcaaagataccagatcctcacacgcatgatgatgtttca
agttttgctgtggtctgtccgggtagattgatctgtgtagaaaaaagtttggcttctact
attgatcgatgctgtcctccatatatactggctacaggctgctctgatggtagcttgaaa
ttgtggaggagtaacatggataagccatcaacacctcaaatttcatgggaacttgtgggt
atgttagtggcacatcaaggacccattagctctatatgcttatcggattgtggtcgtaag
atagcaaccatctgcaaggagcttctttcaaatactgttagcactcttcgtatatgggac
cctgtactccttgcagatgcagggacttttatgttagaggatacattatcctttggtcaa
gatcctgttgctttaaattggctatactgtggaaatggtcagttactgcttggagcctgc
acacagaatcagttgcaagtatattctcagcagcgttgtggtggtcagactttattaaac
tctggaaaattattgaaaaaggacatctgggtttgcattgcgtctactcgtactttccct
cccatttatgacttcttttggggccccagagcaacggctatatttgttcacaatagttac
ttttgtgtaaatagtcagtggctgttccctataaataagaaacatcttgctaatgccgat
ccaaattgcccggattatttgggtagaatggaagaagatattgattctacggtgttcatt
gattgtggacttgatcaattcaagaaaatattacttggtgacagtagaagagattgcaag
tccggtataccattggagattgatttgaaaaaggattatctgtccagcagcttgttttta
gcaagggctcaactgaagtgtggttcggctaccaagctaggtttatggaacatggatgaa
gtgatcgagaagttaaatggatctctgccagtttatcacccagaggccctctttatgaat
atctattcaggaaattggaagcgtgcttacactgctctgaggcatcttaatgagtttctt
tcttctaattcttctcctgagaggaagtatagccctgcaaaatatagcatttgtgttcca
caaattcctttgtcaagtttttttgatgcgcgtatctcagtatattcaaatgacagagga
tttcaatggagcggtgatgcttctctagttacttcatcttctcagtttcaaagaaacttg
gaccaatttacatacagtttggactcctatgcttccagtaatcagttgaattcatcctca
acaaaaactgaacttagtgactttgttgagcctcttgagaatttatacaagtcagcggct
ataagtgacatggagaagattcaaattctttctattatagatcttcttattgaaatgact
aattcacactctggttctgcatatgaaagtcttgatgaacctggacggaggttttgggtt
gcattgaggtttcagcaactacattctttcagacagcatggtagattggcatctgtggag
gagttggttgttgactccaagttgattggatgggcctaccactctgattgccaggaaaac
ttatttgggtctttcctacctaatgatccatcttggccagaaatgcggaatctgggtatt
ggattttggtttacaaatacagcacaattgcgttcaaggatggagaaactggcaagattg
cagtatctaaaaaggaaagatcctaaagattgtgcattactatacatagcactgaataga
attcaagttttgtctagccttttcaaaattagcaaggatgagaaggataagccccttgtt
ggatttctttcacgtaattttcaggaggagaaaaataaggcagctgctttgaagaatgca
tatgtcttaatggggagacaccaactggaattagctattgctttctttctgcttggaggt
gatacttcttctgctgtcaatatttgtgcaaagaaccttggcgatgaacagcttgcgtta
gtgatttgtcggcttgttgaggggcgtggtggaccactagagagacacttaattacaaag
tttatgctaccatttgcaattgagaaggacgattattggttagcaagccttttggagtgg
gagctggggaattactctcaatctttaatacgcatgcttggtttccaaataaattcggca
actgagaagcatgcactctcgtccaatggtgttgctttctcagacccaaacgttggtctg
tattgtctaatgctagcaaccaataattgcatgaggaatgctgttggggagcgaaatatt
gcaatccttagcaggtgggcaatattgacgacagctaccgcgttaaacagatgtgggctt
cctcttgaagctttggagtacctttcatctctaccaaccattcgtggggatacagatgaa
aggggtatgtcagatcttgggcattctgaaaatctacatgcaattctaaatccttcttca
ataaattctttcaattggttatcaagttatgtggctttcgatctggagtttcaaggcaaa
ttagatttgacacttcaatacttatcaaagttggtaagagagcatccaagctgggtagat
attgcttttggatcttctgaagctagtacatgtgtaaaggaatacgaaaatcatgaatat
ttaaaagttcgtgaatctttccaacagaagttatacatggcagttcatctgtttgagcag
aagttttcagtggttcccttccatcttattagcctgattttaatattgctgcaagatcat
gggctatggttcgttggatttgatatattacatggatacacttctcaacatcaagagata
gataaaacccaaacagttgacagattcttatcatatgctcttatgcataagccacttttg
aaggccaccagagaaacttcccttttgttttcacgcgttattgctgcctgtggtataact
tgctctatactgaagtcacattatattgaaaacaatgtctctggcgatagtagatctatg
aggtcagattcgttggggtattactttcaaggtcttacactgtcattgcagagtttaagg
gctgctttgagatttgcctttttctcctcaactgaagatctcaccatgaaaccccttgca
gtcattgatttgattgagtattatgtacagcttgcatgtgcttggcatcgtaaaaactca
aaagttctcttactattggtgcaaccccttgtgatcacatttactaatgggcatacacct
tatgaagttgatatgatgactctcaagaaactccttccccagattcgagaggttgtggct
caaaatgtttctactgatagtgtaggtcttcaggtttctcaagatagaaatataacacat
tcaattccagaagatgaaagatggcaaatcataggggcttgtttatggcaacacatatcc
agactcatgaaacataagttgaatttgttgtcctataaacttgatgatggttgtttttct
ggtatacccgatagaaaacatttttcacgcttacctagctctgcaagtttacagtctgat
agcaatagtataaatgaactgatagaactggtgtccttgagcttgcttaagttattgaag
cccacacttgcacatgtttcttcttattatgtaaaacagctagcatcacttctgcagcat
aaaatggattatgggttgcatgtaaggactcttgtttggttagaagaatctaaccagtct
caaaccagagccctcaatcagcatctaaatcaagatattgtcaaattggacacaatagat
gaaagacatgaatctgacatgttatgggttacctgtgctgatcctaaaatgatatctgaa
agttttgctgaggaaaaaataaactggcctcactctcttgatcgtaaaccctctaaagga
tggagtaacatatgtagaggcattacaactgtagatgaaactgaggaaattcccaatcat
gaagtttcacttaacagtagttctgccagtacagaagcgggatcacctgctaaaagtata
tttcggggtggccattctttccttggtacctggcagaaagacacaacccttacaaaggag
gttacacattttctaaacccaaaagagatatataagagaaacggggagcttttggaggca
ttgtgtctcaactccattgatcagggacaagctgcacttgcaagcaaccgaaagggaata
ttattttttaattggaaagatgatatgtctttcggagatcattcagacgatatatggtca
gaagccgattggccactgaatggatgggctggttctgaatcaacccccgctcctacatgt
gtttctccgggtgttggtcttggaagcaagaaaggtgcacaccttggactgggtggagca
actgttggtgtgggctctttgacaaggccgggaagagatttgacaggtggtggagcattt
gggattccaggttatgctggtattggtgcgtctggtttaggttgggaaactcaggaggac
tttgaggagcttgttgatccaccagctactgtggagaatgcaaatacgagggctttttcc
agtcacccgtctagacctttcttcttagttggttctagcaatacacacatttacttatgg
gagtttggtaaggacaaaactactgcaacttatggagtgctgcctgctgcaaatgtccct
ccaccttatgctcttgcatctatatcagctttgcagtttgaccactgtggacatagattt
gctactgctgccttggatggaactgtatgcacatggcagctggaggtgggaggaaggagt
aacattggtcctacagagtcatctctatgctttaacagccatgcatccgatgttgcttat
gttacttcaagtggatcaatcattgctgttgctggatttagctccaataatgttaatgtg
gttatatgggatacattggctccacctaccacctcacgggcttctatcctttgtcatgaa
ggtggtgcacgctctctttctgtgtttgataatgacataggaagtggctctatctccccc
cttattgtgactggtggaaaaggtggtgatgttggacttcatgatttccggtacattgct
actggaagaagtaaaaggcataggcattctgataaaggtgaacaagtcatgaagacatca
tcgaatattgatatgcatcctgggaatggtaccaagcttggggaacaaaatcaaaatgga
atgctttggtatataccaaaggctcactcagggagtgtcaccaagatatctataatccca
aataccagtttgttcttaacgggaagcaaagatggagatgttaagctttgggacgccaag
agagctaagttagtatatcactggccgaatttgcatgaaaggcacacatttttgcaacca
agcactcgaggctttggtggagtagtccaggctgctgtcacagatataaaagttgtctca
catggttttctctcctgtggtggagatggaactgtaaagcttgttcaactgaaagaccac
caacatcagacatga
DBGET
integrated database retrieval system
