Prunus mume (Japanese apricot): 103332202
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Entry
103332202 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103332202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103332202
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103332202
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103332202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
103332202
NCBI-ProteinID:
XP_008233142
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All DBs
Position
LG5:17853063..17856620
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AA seq
319 aa
AA seq
DB search
MESDGIESVTSLDLMDEDEIHGRPHHFVSVPKPHNNSINIPGTTSVHELLECPVCTNSMY
PPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEI
FPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLEV
GGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
QNPEGAKVCEVPRIICGLN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatggcattgaaagtgtgacatctttggatttgatggacgaggatgagatc
catggccgtcctcaccactttgtttcagttccaaaacctcacaacaatagcattaacatt
cccggcaccaccagtgtccatgaacttcttgaatgccctgtttgcaccaattcaatgtac
cctccaatccatcagtgtcacaatgggcataccctttgctccacctgtaaaacaagggtc
cataaccggtgcccaacttgtagacaagagcttggtgacataaggtgcctagcactggaa
aaggttgctgaatctcttgaactgccttgcaagtactgctctcttgggtgccctgagatc
ttcccctattacagtaaacttaaacacgaggctgtctgcaacttcaggccatacaactgt
ccatatgctggatccgattgctctgctgttggggatattccattccttgttactcatcta
cgggatgatcacaaagtggacatgcattctggatgcacttttaaccatcgttatgtcaag
tctaatcctcgtgaagtagaaaatgccacgtggatgttaactgtcttccactgttttggt
cagtacttttgtctccattttgaagcattccagcttggtatgggtcctgtttacatggca
tttctccggttcatgggtgatgaaacagaagctcggaactacacctacagcctggaggtt
ggaggaaatggccgaaagctcatttgggagggcaatccaagaagcataagggatagccac
aagaaggttagagacagccatgatggcctcataatacagcgcaacatggcacttttcttc
tctggaggggataggaaagagctgaagctgcgagtcacaggacggatatggaaggaacag
cagaacccagaaggggctaaagtttgtgaagtaccacgtatcatttgtggtttaaattga
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