Prunus mume (Japanese apricot): 103332212
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Entry
103332212 CDS
T03196
Name
(RefSeq) protein TSS isoform X1
KO
K03255
protein TIF31
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pmum03012
]
103332212
Translation factors [BR:
pmum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103332212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
CLU
TPR_8
Motif
Other DBs
NCBI-GeneID:
103332212
NCBI-ProteinID:
XP_016650137
UniProt:
A0ABM1LRW2
LinkDB
All DBs
Position
LG5:complement(17898837..17910599)
Genome browser
AA seq
1861 aa
AA seq
DB search
MAPRNSRGKGKGEKKKKEEKVLPVVMDITVNLPDESSVVLKQGISTDRIIDVRQLLSVNI
ETCNITNFSLTHEVRGQRLKDTVDVSALKPCVLTLVEEDYDEQRATAHVRRLLDIVACTT
SFGASPSPTKDQGLKLDASSTGSGKNAPGAQDKSAKKSITTNTSKSQVSTGADKRDVAVD
SETEMSHSCLKLGSFYDFFSLSHLTPPLQFIRRGTKRQVDEIFPQDHLFSLEVKLCNGKV
VHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAYDELLKAFSERNKFGNLPYGFRA
NTWLVPPVSAQTPSVFPALPVEDETWGGNGGGLGRDGKFDLIPWANEFWYIASMPCKTAE
ERQIRDRKAFLLHSLFVDVSIFRAIKAVQHVIGKPELTGSVPNSGILYTERVGDLNVTVT
KDVSNASCKVDTKIDGIQATGVDKKNLAQRNLLKGITADENTAAHDVNTLGVVNVRYCGY
IAVVKVEGKETKKVSSPSQGIELLDQPEGGANALNINSLRLLLHKTTPSDQNKPASHMQI
LEHEELSASCVFVERLLEESFAELEKEELDSDSFVRWELGACWIQHLQDQKNADKDKKPS
SEKAKNEMKVEGLGTPLKSLKNSKKKSDGGNIKLQSESSKSPADGAVGEADNATSPSVES
KFETNAKENELVLTEILSEAAFARLKESETGLHCKSLQELIDLSQKYYSEVALPKLVADF
GSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAV
ISAVDSTEKMAVSIAAALNLMLGVSENEELNKSCNVHPLVWRWLEVFLRKRYRWDLSSFN
YGDVRRFAILRGLCHKVGIEMVPRDFDMDSPNPFRSSDIVSLVPVHKQAACSSADGRQLL
ESSKTALDKGKLEDAVAYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY
QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN
TAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAY
PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASK
GHLSVSDLLDYINPVHDAKGRDMAVKRKSYITKLKEKSYQTISLESSDDSSKETTKEGSD
EETHILEPRDKTDAIQENIPAPVEPQHVVEEIAGQNQTVFDQISSETHVEGEDGWQSVQR
PRSVGSYGRRLKQRRATIGKVYSYQKKYVESDTDYSSAKNTNQNSRYYLVKKRPTSHGSY
AENTASSSQGTKFGRRTVKAVTYRVKSVPSSAKVVTAEPSRNDGKSFSSPSELSLNISPR
GTAPVKNSIVSLGKSPSYKEVALAPPGTIAKMQTELPHSNVPDNQEHGVQIHEEETTDVK
GDSKPNITELENILEEKKDSVLVTTDHLQEETGAAEKKGEINSTDAKDDISSLRVVECLD
GQGSSGVKIHEVVEDKLLKDGVPKSMGTPTKGICEKDPSGTCELHDSFSTLQGVEDAANS
VDTRGQPSKKLSASAAPFNPSPSVARAAPVPMSIAIPSGAGPVPTIAPWPVNMNLHPGPA
TVLSTPMCSSPHHPYHSPPATPNIIQPLPFMYPPYSQPQVIRTGAFPVTSSGFHPNHFAW
QCNVNPNIPEFVHSTVWPGCHPMDFSAPTPVVEPISDPPLESNFHSDDSGPVLPVDIDNV
GETKKETNLLTSEPMSNAIESVKENGPNLCGVEDAQNEPSDSPNRKAGSSSERTNEGEKT
FSILIRGRRNRKQTLRMPISLLSRPYGSQSFKVINNRVVRASDAAKATSFPSNENCTTTA
T
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggcacccagaaacagtcgtggaaagggcaagggagagaagaagaagaaagaagagaag
gttcttcctgttgtcatggacatcaccgtgaaccttcctgatgaaagcagtgttgtttta
aagcagggaatttcaacggataggattatcgatgttcgtcagctattatcagtgaacata
gaaacttgcaatatcacaaatttttcgcttacccatgaggtacgagggcagcgattaaag
gatacggtggacgtctccgcactaaaaccatgcgtcctgacgttggtcgaagaggactac
gatgaacagcgcgcgacggcgcacgtcagacgcttgctggacatcgtggcctgcacgacg
agcttcggggcatcgccttcgccgacgaaagaccaaggtcttaagctcgatgcctcttct
acaggctctggtaaaaatgctccgggtgcgcaggataagagcgccaagaaatccatcacc
accaacacctccaagtctcaagtttccacaggagccgataagcgagacgtggcggtggac
tcggagaccgagatgagccactcttgccttaagcttggttctttctacgacttcttctct
ctctcccaccttactcctcctctgcaatttattagaagggggacgaaacgacaagtcgat
gagatttttccccaggatcacctcttttcccttgaagtgaagctttgcaatgggaaggtg
gttcatgttgaagcttgccgaaagggattctatagcgtagggaagcagcggattctgtgt
cacaacctggtcgatttgttacggcagcttagtagagcctttgacaatgcttatgatgag
ctcttgaaagcattttcggaacgtaataagttcgggaatctcccttacggctttcgagca
aacacatggctggtaccacccgtttcagcacagacaccctcagttttccctgctctacct
gttgaggatgaaacttggggtggaaatggaggtggtctaggaagagatggaaaatttgat
ctgataccttgggctaacgagttttggtatattgcatctatgccttgcaagacagccgag
gagaggcagattcgagataggaaggcatttctccttcacagcctatttgtcgatgtctcc
atttttagagccattaaggctgtgcagcatgtaattggaaaaccggaattgactggttca
gttccaaacagtggaattctttacaccgagagagtaggggacttgaacgtgacagttaca
aaagatgtttctaatgcaagctgtaaggtagatactaaaattgatggaattcaagcaact
ggagtggataagaagaatctagcacaacgaaaccttctaaaagggatcactgctgatgaa
aacactgctgcccatgatgtcaacactctaggtgttgtcaatgtcagatattgtggttac
attgcagttgtcaaggttgagggaaaggaaactaagaaagtcagttctccatctcaaggc
attgaactccttgatcaacctgagggtggcgccaatgcccttaatatcaacagtttgaga
ttactacttcacaagacaacaccttcagaccaaaataaaccggcatcgcatatgcaaata
ctggagcatgaagagctttctgcttcctgcgtttttgttgagagactcttagaagaaagt
tttgctgagctagagaaagaggagctagattctgatagttttgtgagatgggaacttgga
gcttgctggattcaacacttgcaagaccaaaaaaatgcggataaagacaagaaaccatca
tctgagaaggctaagaacgagatgaaggttgagggacttgggacacctcttaaatccctt
aaaaacagcaagaaaaaatcagatggaggcaatatcaaactgcaatctgagagctcaaag
tctcctgcagatggtgctgttggggaagctgacaacgctacatccccttctgtagagtca
aaatttgaaactaatgccaaagaaaatgagcttgtgctgacagagatattgtctgaagct
gcctttgctcgactaaaagaatctgaaactggacttcactgcaagtctctgcaagaactg
atcgacttgtctcagaagtactactctgaagttgctcttccaaaactggtagcagatttt
ggttcattggaactttcaccagttgatggtcggactttaactgatttcatgcatactaga
ggtcttcggatgcgttctctggggcacgttgtcaagctttcagagaagctatcccatgtg
cagtccctttgcattcatgagatgatagtgcgagcgtttaagcacatacttcaggcagtg
atttccgccgttgatagcactgagaaaatggctgtgtcgattgctgctgccttgaatctt
atgctgggggtttcggaaaatgaagaattaaataagtcatgcaatgttcatccccttgtg
tggaggtggctggaggtattcttgcgaaagagatatagatgggatcttagcagcttcaac
tacggcgatgtgaggagatttgcgattctccgtggattatgtcataaggtgggtattgag
atggttccaagggattttgatatggattctccaaatccgttccgaagttcagatattgtc
agtctagtcccagtgcataagcaagcggcttgctcttcggcagatggtaggcaactcctt
gaatcatcaaaaacagctttagataaggggaaacttgaggatgcagttgcatatggcact
aaggcacttgcaaagctggtagcagtttgtggtccataccatcgaatgacagcaggagct
tatagcctccttgctgtagttttatatcacactggagactttaatcaggctacaatttat
cagcaaaaggctcttgatatcaatgagagagaattagggcttgaccatccagacaccatg
aagagttatggggatcttgctgtgttctattacagacttcaacatacagagctggctctc
aagtatgtaaagcgtgctctgtatcttttgcatctcacgtgcggaccatctcatccaaac
actgctgcaacatacatcaatgtggctatgatggaggaaggcctgggaaatgtacatgtt
gccctcagatatctacacaaagctttgaagtgtaaccaaaggttactcggcccagaccat
attcagacagctgcaagttaccatgctattgcaatcgcactctcattgatggaagcatat
cctctaagtgttcagcatgagcagacaactttacaaattctgcgagcaaagcttggccca
gatgacttacgtacacaagatgctgctgcttggcttgagtactttgagtccaaggctttt
gaacagcaagaagctgcaagaaatgggactcgaaagcctgatgcatctatagccagcaaa
ggccacctaagcgtatcagatttgcttgactacattaatccagttcatgatgccaaaggg
agagatatggcggtaaagaggaaaagctacataacgaagttgaaggaaaaatcctaccaa
actatcagcttagaaagttctgatgactcttcaaaagaaaccactaaagagggttcagat
gaagagacacatatacttgaaccaagagataaaacagatgccatccaggagaacatccct
gctccggttgaaccccagcatgtcgtggaagagattgcaggacaaaatcaaactgttttt
gatcagatatcttctgaaacacatgttgaaggtgaagatggctggcaatcagttcaaagg
cctagatcagttggctcctatgggaggcgtctaaaacaacggcgagcaactattgggaag
gtctatagttaccagaagaaatatgtagaaagtgacacggactattcttcagcaaaaaat
actaatcaaaacagtaggtattaccttgtgaagaaaaggccaacatctcatggaagttac
gcagaaaacactgcaagttcctctcaaggtactaagtttggacggagaacagttaaagct
gtaacatacagagtaaagtctgtgccttcgtctgccaaagtagttacagcagagccctct
aggaatgacggcaaaagtttcagttctccatcagagctcagtctaaacatttcgccacgt
ggcactgctccagtgaaaaattctatagtcagtctcggaaaatctccttcatacaaggaa
gtagcactggctccaccaggtactattgcgaaaatgcaaactgagttgccccatagcaac
gttccagataaccaggaacatggtgttcaaatacatgaagaagaaacaactgatgtcaaa
ggagattccaaaccaaacataactgagttagaaaatatactcgaagaaaagaaggattcc
gtattggttacaacagaccacttacaagaggaaactggagctgctgagaagaaaggagaa
attaattcaacggatgcaaaggatgatatctcttcactgagggtggttgagtgtttggat
ggacaaggatccagtggggttaagattcatgaagtggtagaggataaattactaaaagat
ggagtgccaaaatctatgggtactcccacgaagggaatctgtgagaaggatccatctggc
acttgtgaactgcatgactccttctccactttgcaaggtgtagaggatgctgcaaattca
gttgacactcgagggcagccgagtaagaagttgtctgcatcggctgctccattcaatccc
tcaccatccgtggcacgtgctgctccggttcccatgagcatcgcaataccttctggtgcg
ggtcctgtcccaactattgctccttggccagtaaacatgaatcttcatccagggcctgct
actgtcttatctacaccaatgtgctcctcccctcatcacccataccattctcctcctgcc
accccgaacatcatacagccattgccttttatgtaccctccttacagtcaaccccaagta
atccgaaccggtgcctttcctgttaccagcagtgggtttcatccaaatcatttcgcatgg
cagtgtaacgtgaaccctaacatacccgagtttgttcatagtacagtttggcctggctgc
catccaatggatttctctgccccaacacctgttgttgagccgatttctgatcccccattg
gagtcaaactttcacagtgatgattctggtcctgttctgccagtggacattgataatgtg
ggggaaactaagaaagaaaccaatcttctgacatcagagccaatgagtaatgcaattgag
agtgtaaaggaaaacggtccaaacctttgtggggttgaagatgctcagaatgaaccaagt
gacagcccaaacagaaaagctggaagcagcagtgaacggacaaacgagggagagaaaacc
ttcagcattttgataaggggaagaagaaaccgaaagcagactctgagaatgccaataagt
ttgctcagtcgaccatatggctcacagtctttcaaagtcataaataacagagtagtcaga
gcgagtgatgctgccaaagccaccagctttccatcaaatgagaattgcacgacaactgct
acttaa
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