KEGG   Prunus mume (Japanese apricot): 103332214
Entry
103332214         CDS       T03196                                 
Name
(RefSeq) protein SDE2 homolog
  KO
K25059  replication stress response regulator SDE2
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103332214
   03032 DNA replication proteins [BR:pmum03032]
    103332214
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103332214
Spliceosome [BR:pmum03041]
 Complex C
  Other components
   Complex C specific factors
    103332214
DNA replication proteins [BR:pmum03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103332214
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103332214
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin VPg SAP
Other DBs
NCBI-GeneID: 103332214
NCBI-ProteinID: XP_008233160
UniProt: A0ABM0P1R5
LinkDB
Position
LG5:complement(17953191..17955905)
AA seq 463 aa
MEDTKSKTYNLFVTLLEGKTLTLKFTAPDVSAASIKNRLLEITKIPLHHQRLVTGTRQLK
DDSVISCSSDVPYFPTVHLLLRLVGGKGGFGSLLRGAATKAGQKKTSNFDACRDMSGRRL
RHVNAEKKLEEWRAEEEERRLEKNAEDFLKNLAKKGKKGTGDAEAEKYVAKYRAESERCV
SEVLDSVKEAVSGKRKGPAKKAVAQSKRMKIWMGKRKMGESDSDTEDDDSDNEDKKEKSV
VLNSGNNSDSSKDAEGSLDSVTGRKQDGEISGGGSGESGSEEEKEIVVQGTQGQESLHSE
KNDVVESVIHEEKIVRSASTPYSEPDAVLKPEAVQEEKMDCNGPDMGNLDVVDQSQEVSS
SGDVKGNETTSIVSEANGSLESNPQVQEETVASGDAAEIEKPLNFDEFNSAAEMEVLGLE
RLKSELQARGLKCGGTMQERAARLFMLKSTPIEKIPKKLLAKK
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggaggacaccaaatccaagacatacaacctctttgtgacccttttggagggcaaaacc
cttaccctaaaattcacagccccagatgtctccgccgcttccatcaagaaccgccttctc
gaaatcaccaaaatacccctccaccaccagcgtctggttaccgggactcgccagctcaag
gatgattccgtaatttcgtgctcctcagacgtgccgtacttcccaacggtccatcttctg
cttcggctcgtcggcgggaaaggtggttttgggtcgctgctgcgtggggcggcgacgaag
gccgggcagaagaaaacgagcaatttcgatgcgtgtcgtgatatgagcggtcggaggctg
cgccacgtcaatgcggagaagaagcttgaggagtggagggctgaggaagaggagaggagg
cttgagaagaatgcagaggactttctgaaaaatctggcgaagaagggcaaaaagggaact
ggagacgccgaggctgaaaaatatgtggcgaagtatagagctgagtcggagcgctgcgtc
tccgaggttttggattcggttaaggaggctgtgagtgggaagcgtaaagggccggccaag
aaggcggtggcacagtcgaaaaggatgaaaatttggatgggcaagagaaaaatgggtgaa
agtgacagtgatacagaggatgatgacagtgataatgaagataaaaaggagaaatccgtt
gtattaaatagtgggaataactcagattcaagtaaggatgctgagggaagtttggattct
gtgactggtaggaaacaggacggtgagatctcaggtggagggtcgggtgagagtggctct
gaggaagagaaagagattgttgtgcagggaacacagggtcaagaatctcttcacagtgag
aagaatgatgtggttgaatcagtaattcatgaagagaagatagttaggagtgcaagtacc
ccttattcagagcctgatgcggttttgaaacctgaagcagtgcaagaggaaaagatggat
tgcaatggaccggatatgggaaatctagatgtagtcgatcagtcccaggaggtttctagt
tcaggtgatgtgaaaggaaatgaaactacatcaattgtttctgaagccaatggttctttg
gaatccaatccacaagttcaggaagaaacagttgcaagtggagacgctgcagagatagag
aagccactgaattttgatgagttcaattcagcagcagaaatggaggttctcggcctggaa
aggttaaagtctgaactgcaagctcgtgggttaaaatgtggtggtactatgcaagagcgc
gctgctaggctttttatgctaaaatctaccccgatcgagaagattccaaagaagctgctt
gcaaagaaatga

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