Prunus mume (Japanese apricot): 103332391
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Entry
103332391 CDS
T03196
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103332391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103332391
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103332391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
DOCK_N
Motif
Other DBs
NCBI-GeneID:
103332391
NCBI-ProteinID:
XP_008233347
LinkDB
All DBs
Position
LG5:complement(19283809..19286988)
Genome browser
AA seq
278 aa
AA seq
DB search
MEDQKQQQRQGSNNNNANGPLETTRAERAVWLMKCPPLVAKSLKPDASSTSASASSPSDQ
QSSRPVAKVVLSIDPLNSNEDSSSPQFTMELAATESGNMPKCYSLDMSKDFIPMSVFSEL
SQGKLSVEGKILNKFDMKPHNENLENYGKLCRERTKKYMKNRKIQVIDNDNGAHMRPMPG
MIGFVAPGPSEKKKMPTKGSDMKRTRRDRGEMEAIMFKLFERQPNWTLRQLIQETDQPEQ
FLKDILKELCVYNNKGANQGTYELKPEYRKSVEEPTPE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccaaaagcagcagcagcgacaaggcagcaacaacaacaatgccaatgggcct
ttggagacgaccagagcagagcgagctgtttggctcatgaaatgccctccgctcgtcgct
aaaagtctcaagcctgacgcctcctccacttctgcctctgcttcttctccatctgatcag
cagtcttctcgccctgtggccaaggtcgttctctccattgacccccttaactccaatgag
gactcttcctctcctcagttcaccatggaactggcggccactgaatctggaaatatgccc
aagtgttactctttggatatgtctaaagacttcattccaatgtctgtgttttctgagtta
tcacaaggaaagttatctgtggaggggaaaattttgaacaaatttgatatgaagccccat
aatgagaaccttgagaattatgggaaactttgccgtgaacggacgaaaaagtatatgaaa
aacagaaagattcaggtgattgacaatgacaatggggctcatatgaggcctatgccaggg
atgattggttttgtagctcctggacccagcgaaaagaagaaaatgccaacaaaggggtca
gacatgaaaagaacaaggagggaccgtggagaaatggaagccattatgtttaagctcttc
gaaaggcaaccaaattggacgttaagacaactgatccaagaaacagatcaaccagaacaa
ttcttgaaagacatacttaaggaactttgtgtttacaacaacaagggagctaatcaaggg
acgtatgagctgaaaccagaatacaggaaatctgtcgaggagccaactcccgaatag
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