Prunus mume (Japanese apricot): 103332399
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Entry
103332399 CDS
T03196
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103332399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103332399
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103332399
03012 Translation factors [BR:
pmum03012
]
103332399
04131 Membrane trafficking [BR:
pmum04131
]
103332399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103332399
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
103332399
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103332399
Translation factors [BR:
pmum03012
]
Eukaryotic type
Elongation factors
103332399
Membrane trafficking [BR:
pmum04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
103332399
Exosome [BR:
pmum04147
]
Exosomal proteins
Proteins found in most exosomes
103332399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
103332399
NCBI-ProteinID:
XP_008233357
LinkDB
All DBs
Position
LG5:complement(19340520..19343401)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPSGLTTEVKSVEMHHEALTEALPGDNVGFNV
KNVAVKDLKRGFVASNSKEDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
NEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagaaaagattcacattaacattgtggtcattggccatgtcgactctgggaag
tctaccaccactggccatttgatctacaagcttggaggtattgacaagcgtgtgattgag
aggttcgagaaggaggcagctgagatgaacaagagatcattcaagtatgcctgggtgctt
gacaagctcaaggctgagcgtgaacgtggtattaccattgatattgccctctggaagttt
gaaactaacaagtactactgcactgtcattgatgctccaggacatcgtgacttcattaag
aacatgattactggaacttcccaggctgactgtgctgtcctcattattgactccaccact
ggaggttttgaagctggtatttccaaggacggtcagactcgtgagcatgctctcctagct
ttcacccttggtgttaagcaaatgatttgctgctgcaacaagatggatgctaccactcca
aagtactcgaaggcaaggtatgatgaaattattaaggaagtctcatcctatctgaagaag
gttggctacaacccagacaagatcccctttgttcctatctctgggtttgagggtgacaac
atgattgagaggtctaccaaccttgactggtacaagggtcctacccttcttgaggccctt
gacttgatcaatgagcccaagaggccctcagacaagcccctccgcctcccacttcaggat
gtctacaagattggtggcattggtaccgtccctgttggacgtgttgaaactggtatcatc
aagcctggtatggttgtgacctttggcccttctggactgacaactgaagttaagtctgtg
gagatgcaccatgaagctcttacggaggctcttccaggagacaatgttggcttcaacgtg
aagaatgtcgcagtcaaggatctcaagcgtggttttgttgcctcgaattctaaggaggat
ccagccagggaggcagccaacttcacttcccaagtaatcatcatgaaccaccccggccag
attggaaatggctatgcccctgtgctggattgccacacctcccacattgcagtcaagttc
aatgagattctaaccaagattgacagacgatccggcaaggagctcgagaaggagcccaag
tttttgaagaatggtgatgctggatttgttaagatgattcctaccaagccaatggtggtg
gagaccttctccgagtatcccccacttggtcgtttcgctgtccgggacatgcgacagact
gttgctgtgggagtgatcaagagtgtggagaagaaggatccaagtggagccaaggtgacc
aaatctgcagcaaagaagaagtga
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