Prunus mume (Japanese apricot): 103332486
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Entry
103332486 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103332486
KO
K19022
AP-5 complex subunit beta-1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103332486
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
103332486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
103332486
NCBI-ProteinID:
XP_008233451
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Position
LG5:18915945..18920680
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AA seq
1129 aa
AA seq
DB search
MVTASSPPLKPLSLQDWESLIDDFQHGGARQHKWTSAHPIRLSLLDQALSSLARRDFPLK
LHVITFLEEFCDPLFTTASSGTDIVSLRKVLHRLIETLRALIQTPPDGVHITFALKEQMM
LSVTSIVVSLDDDDGGVPIAIVEGLVELLLTVINRPNHGIDRQARALACECLRELEKSRP
CLLSEIGGHLWSLSQNERTHAAQSYILLFTTVVHNIIVRNLGVSILNTTVPLVPFSAPQN
GTGPGGLNHKELRRAMAFLLEWPHVLTPCAMVEFLALIMPIAAALDLQASMLKVQFFGMV
YSSDPMLAHVVLTMYPRFWDAFDGQEGDIVSRLVLLSRESQHHLVFRLLAVHWLLGFGQL
VLKREAKKVNTIVDMGSRFYPSVFDPLALKAMKLDLLAFCSVCADVLKSETVSVENGGVE
DKLVVKLFEDGLVCVSAFKWLPPGSTETAVAFRTLHRFLIGASSHSDNDPSTTRSLMDST
TFSTIQGMLVDLMLECRRLVPVVVALTDRLLGCQKHRWLGERLLQTFDQHLLPKVKLDYN
LVSFFPIFDRIAESDTIPPRGLLELLIKFMAFLVGKHGPYTGLRSWSQGSRVLGICRTLL
MHHNSSRLFLRLSRLLAFTCLYFPDLEVRDNARIYLRILICVPGKKLRDMLNLGEQLGIS
PSSHSSFNVQAPRFSQSLKKSRNISSYVHFERVIPLLVKQSWSLSLSSLGVGSTEPGYLE
GIRDIEPIIEDSEIGDSSNAEDSSNVQIIEEAPIIDRPQEPLRVTDSKISEILGTLRRHF
SCIPDFRHMPGLKVRLSCSLRFESEPFSRIWGVDSPAGVSDELDALPALYATVLKFSSSA
PYGPIASYHIPFLLGEPPRKTNVSGQTASLAIVPVENGSGEEESFRAPVAIELEPREPTP
GLIDVSIETNAENGQIISGQLHSITVGIEDMFLKSIVPPDIQEDATPVYYLDLFTALWEA
CGTANTARETFQLKGGKGVTAISGTRSVKLLEVPASSLIQATERYLAPFVVSVIGEPLVN
IVKDAGIIRNVIWKDAASDSSLDITSSGTDFDRGPPHLTYTDDEDERDSPVNIRKRNMGC
FLILIFLPPRFHLLFQMEVSDVSTLVRIRTDHWPCLAYTDDYLEALFLA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggtaacggcgtcgtcgccgccgttaaagccgctctcgctccaagactgggagtcatta
attgacgacttccagcacggcggcgcacggcaacacaaatggacctccgcgcacccaatc
cgcctctccctcctcgaccaagccctctcctctctcgccaggcgcgactttcccctcaag
ctccacgtcatcaccttcctcgaagagttctgcgacccgctcttcaccaccgccagctcc
ggaaccgacatcgtttcgttgcgcaaagtcctccaccgtctgatcgaaaccctacgcgcc
ctgatccagaccccgcccgatggggtccacatcaccttcgcgctcaaggagcaaatgatg
ctctccgtcacctccatcgtcgtctccctcgacgacgatgacggcggcgtcccaatcgcc
atcgtcgagggcttggtggagctactgttaacggtgatcaaccgtcccaatcacggcatc
gaccgtcaggcgcgtgcgctcgcgtgtgagtgcctgcgcgagttggagaaatctcgcccc
tgcttgctttccgaaatcggcggacatctatggagtctctcccagaacgagagaactcac
gctgcgcagagctacattctcttgttcaccaccgtcgttcacaacatcatcgttagaaat
ctcggcgtttcgattctcaatacgacggtgcctctcgtgccgtttagtgctccgcagaat
gggacgggtccgggcgggttgaatcacaaggagctgaggagagcgatggcgtttttgcta
gagtggccgcacgtgttgacgccgtgtgcgatggttgagttcttggctttgataatgcca
atcgcggcggcattggatctccaagcctccatgcttaaggtgcaattttttgggatggtt
tattcgtccgatcctatgctcgcccacgtcgttttgaccatgtacccgaggttctgggac
gcgtttgatgggcaagaaggtgacattgtgagcaggcttgtgttactatccagagaatcg
cagcaccacttggtttttcgattgctggcagtgcattggttgttgggttttggtcagttg
gtgttgaaaagggaggctaagaaagtgaataccattgttgatatgggttcgagattctat
ccgagtgtgttcgacccgcttgctttgaaagcgatgaagcttgaccttcttgccttttgc
tcggtttgtgctgatgtcttgaaatcggaaactgtttcggttgagaatggtggggtggag
gataagttggtggtgaagctgttcgaagatggacttgtttgtgtatcagcattcaaatgg
ttacctccggggagcactgagactgcagtggcatttcgaactttgcataggttcttgatt
ggggcatcatctcattcagacaatgatccttccaccactagaagtctgatggactccacc
actttcagtaccatacaggggatgctggtggacctgatgttggagtgtcggagattggtt
ccagtggtagttgctttgactgatcgcttgttgggttgtcaaaagcaccgttggttggga
gagcgcctgcttcagacatttgatcagcatttgcttccaaaagtgaaattggattacaac
ttggtttccttctttccaatatttgatagaattgccgaaagtgatacaattcctcctcga
ggattgctagagcttcttattaagttcatggccttccttgttggtaaacatggcccatac
acaggactgagatcatggtctcagggaagcagagttcttggcatctgtcgaaccttgctg
atgcatcacaatagctctcgattgttccttagactatctcgccttttggcatttacttgc
ctttactttcctgatttggaggttcgtgacaatgcaaggatctaccttcgaattttgatc
tgcgtgccgggaaagaagctcagggacatgctgaatcttggggaacaactcggtatttca
ccatcttcacattccagtttcaatgtccaggctcctcgcttttctcagagtctcaagaaa
tctaggaatatctcctcatatgtccattttgagcgagtaatccccctactagtcaaacag
tcttggtccttgtctttatcatctttgggtgttggaagtactgaacctggttaccttgaa
ggcatcagggacattgaacccataatagaggatagtgagattggtgacagtagtaatgct
gaggacagtagtaatgtccaaattattgaagaagctcctataattgatcgaccacaggag
ccattgcgtgtgacggattcaaagatttcagagatattaggaacattgaggaggcatttt
tcatgcattcctgattttagacatatgccaggacttaaggttagactatcttgtagtttg
aggtttgaatctgaacctttcagtcgaatatggggagttgattcccctgctggtgtttca
gatgaattagatgcccttcctgctttatatgcaaccgtgctaaagttttcatcctctgca
ccatatgggcctattgcatcctatcatataccttttcttcttggtgagcctcccagaaaa
actaatgtatctggtcagacagcctcattagctattgttcctgtagaaaatggatctgga
gaagaggaaagctttagagctccagtagcaattgaattggaaccacgagaaccaacacct
ggtctaattgatgtttccattgaaacaaatgcagaaaatggtcagataatcagtggtcag
cttcacagtatcaccgtaggcatagaggatatgtttctcaagtctattgtaccgcctgac
atccaggaagatgccacacctgtttattacttagacttgttcactgctctttgggaggca
tgtggtactgccaacactgcacgggagacctttcaattgaaaggaggcaaaggggttaca
gcaatcagtggtacgcgatcagtcaagctacttgaagtccctgcatcatctttgattcag
gctactgagcgctacttggcaccctttgtggtgagtgtgattggtgaaccactcgttaat
attgtaaaggatgcaggaatcattaggaacgtcatctggaaggatgcagcctcagattct
tcccttgatattactagctcagggactgattttgatagaggccctcctcatcttacgtac
accgacgatgaagatgaaagggacagtcctgtcaatatccgtaaaagaaacatgggttgc
tttcttattttgatatttcttccaccaaggttccatctcctcttccaaatggaagtgtcc
gatgtttcaacgttagtccgaattcgaactgaccactggccgtgcttagcttatactgat
gattatttggaagctttatttttggcatag
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