Prunus mume (Japanese apricot): 103332508
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Entry
103332508 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103332508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103332508
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103332508
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103332508
NCBI-ProteinID:
XP_016649777
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Position
LG5:19642252..19644944
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AA seq
534 aa
AA seq
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MKCLRLDNDLKITALVSRSVTDLFYIANIVVQVYRYKICSNLIKLFLPGSWSSKLAELRK
IWQSYIIVDILAILPLPQVIILIFFSKMRASRSLRKLMNFLVMVQYVPRVLRIYLSCKKS
KKPFKGHTALWVKGLLNFFLYILASHVLGAFWYFFAVQRITSCWQHVCQYENGCGPSNFN
CHDHHTLRNITVLDDLCPINSSNTTLFDFGIYLSVLQSGILWSTNYPLKFSNSFCWGLRN
LSSLASNLEPSSNTWEILFVACISIIGLLLFVYLIGNLQTYVLLDTERLESHRRKMKLER
KMKAKGRDVELWLSKHGTPLRRKPDIMEKVRLELEENWDIDVDQEILSILPRELQEYIET
CKPLSRLKNVEVPPFRNMDEQVLIEISKHLKPKRYINNQIIIKEDRPLEMMFFVVDGRVI
IKKKDCSSKFQRRAGHLYGEKLLVWPSWTSFHEGTRPIATESVQAIDDVEALVLLASDMV
SIGSRFRSDFDKLKLSLSQSQQTDSHWELLTCDKVTMLQQVPKLREMDKQVLKA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgaggttggacaacgacttgaagattacagctcttgtctcacgatcggtc
acagatctgttttatatagcaaatattgtcgttcaagtttacagatataagatttgttca
aacttaatcaaactatttcttcccggaagttggtcgtccaagttagctgaactaaggaag
atatggcagtcatacatcatagttgacattttagctattcttcctcttccacaggtgata
attctcattttcttttcaaaaatgagggcctcaagatctttaaggaagcttatgaacttt
cttgttatggtgcaatatgtaccacgagttcttcgcatctacttatcatgcaagaaatcc
aaaaaacctttcaaaggacataccgcattatgggttaaaggtttactcaattttttcctc
tacatccttgctagtcatgtacttggagctttttggtacttttttgccgttcaacgaatt
acaagttgctggcaacatgtatgtcaatatgaaaatggatgtggccctagtaattttaat
tgtcatgatcaccatacattgagaaatattacggttctagatgatttatgccctataaat
tcatcaaatacaactctctttgattttggtatatatttaagtgtccttcagtcgggtata
ttgtggtcaacaaactatccgctgaagttttcgaacagtttttgttggggcttgcggaat
ttgagttctcttgcttcaaatcttgagccgagctccaatacatgggaaatcctctttgtg
gcttgtatttctataatcggcttgctactatttgtatatctcattgggaatttgcagaca
tatgtgctgttagatactgaaagattagagtcgcacagacgcaagatgaaacttgaacgg
aagatgaaagcgaaaggccgagatgtagaattatggttatctaaacatggcactcccctg
cgcagaaagccggatatcatggaaaaggtacgattagaacttgaagaaaactgggatatt
gatgtggatcaggaaatcctctctattcttccccgggaacttcaagaatatatcgaaact
tgcaagcccttgagtaggctgaagaacgtagaggtgccaccatttcgaaacatggatgaa
caagttttgatagaaatctcaaagcatcttaagcccaagaggtatattaataatcaaatc
attattaaagaggatcgaccacttgaaatgatgttttttgttgtggacggacgtgtaatc
attaaaaagaaagattgttccagtaagttccaacgacgtgctggacatctgtatggagag
aaacttctagtttggccatcatggacgtccttccatgagggaacaaggcctatagcaacc
gagtctgttcaggccattgatgatgttgaagcccttgttctcttggccagcgacatggtc
agtataggctctagattcaggtcagatttcgataagttgaagctgagtctcagtcagagt
caacaaacagattcgcattgggagcttttgacttgtgacaaggtgactatgctacaacaa
gtgccgaagcttcgagagatggataaacaagtgttgaaagca
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