Prunus mume (Japanese apricot): 103332536
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Entry
103332536 CDS
T03196
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103332536
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103332536
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103332536
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103332536
03041 Spliceosome [BR:
pmum03041
]
103332536
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103332536
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
103332536
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103332536
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103332536
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103332536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
103332536
NCBI-ProteinID:
XP_008233499
UniProt:
A0ABM0P2K6
LinkDB
All DBs
Position
LG5:complement(19940747..19944966)
Genome browser
AA seq
316 aa
AA seq
DB search
MASQGQGAMDPAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASREIFLQQPNLLEL
EAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDSFNCLPVAALIDDKILCMHGG
LSPDLTNLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEF
LMKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQI
LKPAEKKTKFMMSTKM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcaagggcagggagcgatggaccctgccgtactcgatgacataatcagacgg
ctcacggaggtccgattagcccggccgggaaagcaggttcagctttcggagtctgagatc
aaacagctttgtgttgcttccagagaaatctttcttcagcagcccaatttgctcgagctg
gaagccccaatcaaaatctgcggtgacatccatgggcaatacagtgacctattaaggctc
tttgaatatggcggtttcccacctagtgcaaattatcttttcttaggcgactatgtggat
cgtggcaaacagagtttagaaacaatctgcctcttgcttgcctataaaattaaatatcca
gagaacttctttctgctaagagggaatcatgaatgtgcctctattaatcgtatatatgga
ttctatgatgagtgcaagcggcgatttaatgtgagactttggaaatccttcactgacagc
tttaactgccttcctgtggctgcacttatagatgacaaaatattatgcatgcatggtggt
ctttcccctgatttgacaaacttggatcagatcagaaacttacctcgtccaactgctgtt
cctgatactggcttgctttgtgatttgctctggtcagatcctggtagagatgttaaggga
tggggaatgaatgacagaggagtctcatatacatttggccccgataaggtggcagagttc
ttaatgaagcatgatttggaccttgtttgtcgtgcccatcaggttgtggaggatggttat
gaattctttgccgacaggcaacttgttacaattttttcagcccccaactactgtggtgag
tttgacaatgctggtgcaatgatgagtgtagatgagaacttaatgtgctctttccagatt
cttaagccagccgagaaaaaaacaaagttcatgatgtcaacaaaaatgtga
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integrated database retrieval system
