Prunus mume (Japanese apricot): 103332551
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Entry
103332551 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103332551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103332551
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103332551
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GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103332551
NCBI-ProteinID:
XP_008233515
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Position
LG5:20048742..20055863
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AA seq
902 aa
AA seq
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MSNSEIALVVENTEEKAAARNRDSNSEATVEISSMKIEDGPPKEESHDPQESFLQKWKKI
FLASCLFALLLDPLFLYVPMLKDDVKCLQSDRNLEIAALLLRSFTDLFYIFDIIFQIYRS
DYFAGLMNEYHIFCLEHSNYSKIKFCWKYVVPTIAKTIWGPYHILIDILAILPLPQVAIL
IFFSEMRDLRSLNTIRMVIMNLFVLLQYVPRILRIYLSCKELKRTPKKETGETTKWVKGV
LNFFMYIIASHIFGAIWYFLAIQRMATCWHDACRKANGCNTSNFGCHDHHTFRNITFLND
LCPISLVNTTLFDFGIYIAILQSGIPGSTNYFVKFSKCFWWGLQNLSSFGSNLEPSINGW
ETLFAACTSIIGLLLFLYLIGNLQAYMQFDTTRIEAHRHKMKVKRKMKEKGQEIELWLFG
IPEWLKKDIKPLIMDKVRQELEEDRDADLNFILSTFPSENQIQIKSAMPITRLKRVPIFQ
NMDESVLEAICLYLEPKKYTKNDIITKEGEPMMLLLIVDGFVDIEERDDSINLQRVSGEV
YGEELLVWPLSNSFPDVVPLATVSAVGDVKAYTLTASDLKSVVFECRIQYFFGMIACEKF
TAKEVDKATQNYHASRIIRRQQSITSGRLSASVYKGELPDKTAVEVERYTVNSSDVDFST
FVKLVAVASRTNHINLVRLLGWCLEGRTIALVSEYIPNACTLFQRIYGKEGKASSPLSLE
LRMKIASETAGALAYLRSLTTTPILPSFVSTSSILLDDNCTAKLRSFGLRFVPNDSRDSL
SSIRQGCFDPESKTLIEKLDVYGIGVVLAELLTSPNAISSIGKRDLEKLKILFQILVEED
RLNEILDGKIIVKEGDFETAKKVAHLATRCLRYEKEEMPSMKGCIFAHHLNPRCTLTTPP
KS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactccgaaatagctttagttgtggagaacacggaagagaaagccgctgcacgt
aatcgtgattcaaactcagaggctacagtggaaatttcaagcatgaaaattgaagatgga
ccacccaaagaggaaagtcatgatcctcaggagtctttccttcaaaagtggaagaagata
tttttagcatcatgtctgtttgctcttctgctggatccattgtttctctacgttcctatg
ctcaaggatgatgtcaagtgcctgcaatcagacagaaacttggagatagcagctcttctt
ttaagatcattcactgatcttttctatatatttgacattatttttcaaatctatagatct
gattactttgcaggtttaatgaatgaatatcatatcttttgtttggagcactccaactac
tcaaaaataaaattttgttggaagtatgttgtgccaacaatagctaagacaatctggggt
ccatatcatatcttaattgatattttggctattcttccgcttcctcaggtagcaattctc
attttcttttcagaaatgagggacttaagatctttgaacacaataaggatggttattatg
aacctttttgttttgttgcaatatgtgccacgaattcttcgcatctacttatcatgtaaa
gaacttaaaaggactccaaaaaaagagactggagagactaccaaatgggttaaaggtgtc
ttgaatttctttatgtacatcatcgctagtcatatatttggtgccatatggtactttttg
gctattcaaagaatggccacttgttggcatgacgcatgtcgaaaagcaaatggatgtaac
actagtaactttggatgtcatgaccatcacacattcagaaatataacatttctaaatgat
ttgtgccctataagtctggtgaatacaacgctcttcgattttggtatatatattgcaatc
cttcaatctggtataccggggtcaacaaattattttgtgaagttctccaagtgcttttgg
tggggcctgcaaaatttgagttcttttggttcaaaccttgagcctagtatcaatggatgg
gaaactctcttcgcggcttgtacttctattattggcttgcttctattcttatatctcatt
ggaaatttgcaggcatacatgcagtttgataccacaagaatagaggcccatagacacaag
atgaaagtgaaacggaagatgaaagagaaaggtcaagagatagagctgtggttatttggc
atccccgaatggttgaaaaaggatattaaaccgctgatcatggacaaggttcgacaagaa
cttgaagaagacagggatgctgatttgaactttatcctctctacttttccctccgagaat
caaatccaaattaaaagtgctatgcctatcactaggttgaagcgagtgccaatatttcaa
aacatggatgaaagtgtgttggaagcaatctgtttgtatcttgagccaaagaagtacact
aaaaacgatatcattactaaagagggtgaaccaatgatgctgctcctcattgtggacgga
tttgtagacattgaagagagagatgattctattaacttgcaacgagtttcaggagaagta
tatggagaagagcttctagtttggccattgtcgaactcatttcccgacgtagtaccgctt
gcaacggtgtcggcagtaggtgatgttaaagcctatactctgacagctagcgacttgaag
agtgtggtgtttgaatgcagaattcaatatttctttgggatgattgcatgtgaaaagttt
actgcaaaagaagttgacaaggcaacacaaaattaccatgcaagtagaatcatcagaagg
caacaatctattacctctggcagactctctgcaagcgtttacaaaggggagctaccagat
aaaacagcggttgaggtagagaggtacacagtaaatagttccgatgttgatttttcaact
tttgttaaactggtagctgttgcttctcgcaccaaccacataaatttggtgaggctctta
ggttggtgtttggaaggacgaacaattgcactggtttctgagtacattccgaatgcctgt
actctttttcaacgcatttatggaaaagaaggcaaagcatcatcaccactttcattggag
ttacgaatgaagatagcatcagaaaccgcaggagccctagcttacttacgctcattaact
accacgccaatcttaccctcttttgtgtcgacaagtagtatacttttggatgataattgc
actgcaaagttgcgcagctttggacttagatttgtgcccaatgatagccgggattcattg
tcatctataaggcaaggatgcttcgaccctgaatcaaagacactaatagaaaagcttgac
gtctatggcattggagttgtcctagcggagttactaaccagtccgaatgcaatttcttca
atcgggaagcgtgacttggagaagctgaaaatcttatttcaaattctagtggaagaggat
cgcttgaatgaaattctcgatggtaaaataatagtgaaggaaggagattttgagacagcc
aaaaaagtggcccatctggcaacaagatgtttaaggtatgagaaggaggaaatgccttcc
atgaaagggtgcatttttgctcaccaccttaaccctaggtgtaccctcaccacccctccc
aaaagttga
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