Prunus mume (Japanese apricot): 103332565
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Entry
103332565 CDS
T03196
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103332565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103332565
Spliceosome [BR:
pmum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103332565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
103332565
NCBI-ProteinID:
XP_008233529
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All DBs
Position
LG5:complement(20144421..20148935)
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AA seq
885 aa
AA seq
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MEKERLSKRHREDRDRDHHKHRSRDADEKRSSKDSDNHRHHHRSDRDSKRERSHEPRDHK
SRRERSREPSDDLDIARDQWERSYEPRGEREGSRERSRHRETKRERSEEREEYKRKRKER
ERSEGRDGDVVDLDDKKRARVWEEERKDRKRFEEDGKEVNGGQRQSRRFEDRRVKEEEDG
DYGGAVERNNELNVNASEVKKEEVGDDQLGNFQGDTTTPNGSGWVGNGAALESTNASRIV
PETSFTPSHPLPTKVSSIYTTNENKGVSITRSHEVHGKSSTDGTSSTAGRSGNLSLDDVE
KIKKALQKQKELTEKLKKIPQLNKGANARKEASQNLGSKELKPPSATAGILHAPAPSTTG
GTAAPGVRFDSSKLPVAPAASSTSGMIAEAGLTAVPNLEAVKKAQELAASMGFRQDPQFA
PLINLFPGQVATDVAAPQKPTKAPVLRLDALGREIDELGNLVNATKPNNLSTLKVNINKQ
KKDAFQILKPELDVDPESNPFFDPMMGINKTKILRPKRMNFQFVEEGKWSRDAEHIKLKS
KFGEAQAKEQKAKQAQLAKAKAAPDVNPNLIEVSERVITKEKPKDPIPEIEWWDVPLLHS
GTYNEVIDGAVVENKLKMEKITIYVEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKR
LAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID
RNIARKLTPAERREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGS
TVISDGMNVVVVEGGSKSIKRYAKVMLRRINWAEAVKDEEEEDDDVNNDKPANKCVLVWQ
GSVARPSFNRFSVHECMTEAAARKIFADAGVAHYWDLAVNFADDE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagagattgagcaaacggcaccgcgaagatcgagacagagaccaccacaag
catcgcagtcgtgacgccgatgaaaagcgatcatcaaaggactccgataaccatcgccac
caccatcgatcggaccgcgattccaagcgcgagcgctctcacgagccccgagatcacaaa
tctcgtcgcgaaaggtcacgcgagccgagcgacgacctcgatatagcacgtgaccagtgg
gagcggtcctacgagccgaggggcgagagagaggggagccgagagaggtccaggcatcgc
gaaacgaagcgcgagaggtcggaagagagagaggaatataaacgtaagaggaaagagagg
gagaggagtgagggtagagatggggatgttgttgatttggacgataagaagagggctagg
gtttgggaggaggagaggaaagataggaagcgatttgaggaagatgggaaggaagtgaat
ggaggtcagagacagagtaggaggtttgaagaccgtcgagtaaaggaagaagaggatggt
gattatggcggagccgttgaacgcaacaatgaattgaatgtgaatgcaagtgaggttaag
aaagaggaagtgggtgatgaccagcttggtaattttcagggcgacaccaccaccccaaat
gggagtggttgggtgggtaatggtgctgctctggaatctactaacgcatcaaggattgtg
cctgagacctctttcacacctagtcatccccttcctaccaaggtatcttcgatttatacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatggaacatcttcaactgctgggagaagtgggaatctgtctcttgatgatgtagaa
aaaattaagaaagctttacaaaagcagaaggaattgactgagaagctgaagaagattccc
cagttgaacaagggtgccaatgcaagaaaagaagctagccagaacttgggatcgaaggag
cttaaaccaccatctgccactgctggaatactgcatgcaccggccccatcaacaactggt
ggtacagctgctccgggggtaagatttgattcatcaaaactacccgttgcaccagcagct
tcatctacaagtggcatgattgcagaagctggccttacagccgttcccaaccttgaagct
gttaaaaaagcacaggagcttgctgccagtatggggttccgccaggacccccagtttgct
ccccttataaacttgtttccaggacaggtggcaactgatgttgctgcccctcagaagcct
actaaggcccctgttcttcgtcttgatgcccttggaagggaaatagatgaacttggaaat
ttagtgaatgcgactaaaccaaacaacctcagcaccctaaaggtcaatattaacaaacag
aagaaagacgcattccaaattcttaaacccgaattggatgtggatcctgaatcaaatccc
ttttttgatccaatgatgggtattaataaaaccaagattttgaggccgaaaaggatgaat
ttccagtttgtagaggaaggaaaatggtcaagagatgctgagcatataaagttgaagagt
aaatttggagaagcacaagccaaagagcaaaaggcgaagcaggcacagttggcaaaggca
aaggcagcaccagatgttaatccaaatttgatagaggtatcagagagagttatcaccaaa
gaaaaaccaaaggatccaattcctgaaattgagtggtgggatgtgcccctattgcactct
ggtacttataatgaagtcattgatggcgcagtagtggaaaataaattaaagatggagaaa
atcaccatctatgttgaacatcctcaacctatcgagccccctactgagccagctcctcca
ccgcctcaaccactgaagctgaccaagaaggagcagaaaaaactccgtacacagaaacgc
ctggccagagagaaagataggcaggagatgattagacaaggcctgatcgaacccccaaag
ccaaaagttaaaatgagtaatttgatgaaagttcttggctctgaagcaacccaagatcca
accaggcttgaaaaggagattcggagtgctgctgctgagcgtgaacaagctcatatagac
aggaatattgcacgaaagctcactcctgccgagcgccgtgagaagaaagaaaggaagctt
tttgatgacccaaataatgtggagaccatagtctcagtttacaggatcaatgaactgtca
catccaaaggcccgcttcaagattgatgttaatgcacgagagaaccggctaactggatca
actgtgatctcagatggtatgaatgtagtggttgttgaaggtggcagcaaatctattaag
aggtatgctaaagttatgcttaggcgcataaactgggctgaagctgtaaaagatgaagaa
gaagaagatgacgatgtaaacaatgataagcctgcaaacaagtgtgtgttagtatggcaa
ggaagtgttgccagaccaagcttcaatagattttctgttcacgagtgcatgactgaagct
gctgcccggaagatttttgctgatgctggcgttgctcattattgggatcttgcggtcaat
tttgcagatgatgagtag
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