Prunus mume (Japanese apricot): 103332602
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Entry
103332602 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103332602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103332602
04147 Exosome [BR:
pmum04147
]
103332602
04090 CD molecules [BR:
pmum04090
]
103332602
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103332602
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103332602
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103332602
CD molecules [BR:
pmum04090
]
Proteins
103332602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_15
Zeta_toxin
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
103332602
NCBI-ProteinID:
XP_008233570
LinkDB
All DBs
Position
LG5:20330867..20339155
Genome browser
AA seq
1385 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYMDQSVDASAQPMEQEEEMEEPEEIEP
PPAAVPFSRLFTCADRLDWVLMTVGSLAAAAHGTALVVYLHYFAKIIQILWMDKNQPGGQ
PPQPGISEVQFQKFMDLALSIIYIATGVFAAGWIEVSCWILTGERQTAVIRSNYVQVLLN
QDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWQIAA
ITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS
YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVSQGKAHGGEIITALF
AVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSTVNHEGTTLVTVQGNIEFRNVY
FSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENI
KNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATVDQIEEAAKIAHAHTFITSLEGS
YDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLG
RSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMP
MRNYKETATFQIEKDSSASHSFQEPSSPKMMKSPSLQRASGMFRMGDGNFNSQESPNARS
PPAEKMLENGQPLDSADKEPSIKRQDSFEMRLPELPKIDVQSVNQQTSNGSDPESPVSPL
LTSDPKNERSHSQTFSRPHSHSDDFPMKLKEEKSTHQKKAPSFWRLAQLSFAEWLYAVLG
SIGAAIFGSFNPLLAYVIALIVTAYYRGDEGRHLSQEVDKWCLIIACMGIVTVVANFLQH
FYFGIMGEKMTERVRRMMFSAMLRNEAGWFDEEENSADTLSMRLANDATFVRAAFSNRLS
IFIQDSAAIIVAVLIGMLLQWRLALVALATLPILTISAIAQKLWLAGFSRGIQEMHRNAS
LVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFFHGMAIGFAFGFSQFLLFACNA
LLLWYTAISVKNKYMDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDR
VPKIEPDENSAMKPPNVYGSIELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGS
GKSTIISLIERFYDPVAGQVLLDGRDLKVYNLRWLRHNASEAEMKEAARIANAHHFISSL
PHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTL
IMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLMAKNGLYVRLMQPHFGKGLR
QHRLV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctcgggggctgttcgggtggtcgcccccgcacatacagcccttgacgccg
gtctccgaggtgtccgagccgcccgagtcgccgtcgccgtacatggaccagagtgtcgac
gcgtcagcccagccgatggagcaggaggaggagatggaggagccggaggagatcgagccg
ccgccggccgccgtgcccttctcgcggctcttcacctgcgcggaccgcctcgattgggtt
ctcatgaccgttggatcgctcgccgccgcggctcacgggacggctctagtggtgtacttg
cactacttcgcgaagataattcagatactctggatggacaaaaaccagccaggcggccag
ccgccgcagcctggtattagcgaggtgcagttccagaagtttatggatcttgctttgtcc
atcatttatattgccacaggcgtttttgctgctgggtggattgaggtctcatgctggatt
ctgacgggagaaaggcagactgctgtcatcaggtcaaattatgttcaagtattacttaat
caggatatgagtttttttgatacctacggaaacaacggggacattgtgagccaagtattg
agtgatgtgctgctcattcagtctgctcttagtgaaaaagttgggaactatattcataac
atggctacatttttcagtggtctcattattggattcatcaactgttggcagattgcggca
ataacattggccactggcccatttattgttgctgctggaggaatatcaaacatatttctc
cataggcttgctgagaatattcaagatgcatatgctgaagcagctagcattgcagaacag
gcagtctcttacattaggacgttatatgcatttacaaacgaaacattagccaagtattca
tatgcaacatcactgcaagcaactctcagatatggcatattgataagccttgtgcaagga
cttggacttggatttacttatggtcttgccatttgttcttgtgccttgcaattgtgggtt
ggaaggttcctggtttcgcaagggaaagctcatggtggtgaaattataacagcccttttt
gctgtaatattaagtggccttgggctgaatcaagcagcaacaaacttctactcatttgat
caaggtcgaattgctgcttatagactttttgagatgataagtcgatcatcctctaccgtt
aatcacgagggaactaccctagtgaccgtgcaaggaaatattgagtttcggaatgtatat
ttcagttatctatctcgtcctgagatcccgattttgagtggtttttacctcactgtacct
gctaagaaagctgtggcactcgtcggcaggaatggttctggaaagagcagtattatcccc
ctcatggagcggttttatgatcctacattaggagaagttcttttggacggagaaaacata
aagaacctgaaactggagtggcttagaagtcagatagggctagtcacgcaggagcctgcc
ttgctgagtttgagtataagagataatattgcttatggccgggatgctacagtggatcaa
attgaagaagctgctaaaatagcacatgcgcatacatttattacctcacttgagggatca
tatgatacacaggtgggaagagcaggcttagcattgacggaagagcaaaaaataaaactt
tcaattgccagagctgtgcttctaaacccgtccattcttttgcttgatgaggtcactgga
ggacttgattttgaggctgaaagagctgttcaagaagctctagatctcctcatgttggga
cgttcaactataattatagctcggcggcttagtcttataaggaacgctgattatatagct
gtgatggaggaaggccaactagttgagatgggtacgcatgatgagttattaactctggat
ggcctatatgcggagcttctcaaatgtgaagaggctgcaaaacttcctaggaggatgcca
atgaggaactacaaggagactgcaaccttccaaattgaaaaggattcttcggcaagtcat
agcttccaagaaccatcctctccaaaaatgatgaaatcaccctcacttcagagagctagt
ggcatgttccggatgggagatggcaattttaactcacaggagtcaccaaacgctaggagt
cctccggcagagaaaatgttggaaaatggtcagcccttggattcagcagataaggaacca
tcgataaaaaggcaggatagttttgaaatgagactacctgagttacccaagattgatgtt
cagtctgtaaatcaacagacatcgaatggttcggaccctgaatcccccgtttcacccctt
ttgacatctgatccgaaaaatgagcgttcccattcacaaacctttagccgtccacatagc
cattcggatgattttcccatgaaattgaaggaagaaaaaagcacacatcaaaagaaggca
ccatcattttggaggcttgcacagcttagttttgcagagtggctttatgctgtgttagga
agcattggtgctgctatctttggttcctttaatcctcttcttgcttatgttattgcactg
atagtaacagcatactacagaggtgatgaaggtcgtcacttgagtcaggaagtagacaaa
tggtgcttgatcattgcttgcatgggtatagtgacagtcgttgccaatttcttgcagcat
ttctactttggtattatgggggagaaaatgacagaacgagttcgtagaatgatgttctca
gcaatgctgcgcaatgaagctggatggtttgatgaagaagagaacagtgccgatacctta
tccatgcgcttggcaaatgatgctacatttgtacgggctgcttttagcaatcggctttca
atatttatacaggatagtgctgctattattgtggctgttctcattgggatgttgctacaa
tggcgattagcactagtggctttggcaactctaccaattctcactatttctgccattgca
cagaaattatggcttgctggtttctcaaggggaattcaggagatgcacaggaacgcatct
ttggttctcgaggatgcagttagaaacatttacactgttgtggcattctgtgctggtaac
aaggtaatggagctgtacagattgcagctaaagaaaatatttaagcagagtttctttcat
ggaatggccattggctttgcatttggcttttcacagttccttctttttgcctgtaacgcc
cttcttctctggtacactgcaatctctgtgaaaaataagtacatggatctacctactgct
atcaaggagtacatggttttctcttttgctacatttgcactggtagagccttttgggttg
gctccttacatactaaaacgccgtaaatctctcatttcagtatttgaaatcattgatcga
gtgccaaagattgagccagatgaaaactcggcaatgaaaccacctaatgtttatggaagc
attgagttgaaaaatgttgacttctgttatccaactcgcccagaactgttggtactgagc
aatttcagtctcaaagtaaacggagggcaaactgtagctgtggtgggagtttcaggatca
ggaaagagcactataatttctttgattgagagattttacgatccagttgctggccaagtc
ctactggatggccgagatctgaaagtttataatttgagatggttaaggcacaatgctagc
gaagctgagatgaaagaggctgcaagaatagcaaatgctcaccatttcatcagcagcttg
cctcatggttatgacacgcatgtggggatgagaggtgttgacctgaccccaggacagaaa
cagagaattgcaattgctcgtgtcgtgctaaagaatgctcccatcttgttattggatgaa
gcaagctcgtccattgaatccgagtcaagccgagtggtgcaggaggctcttgatacatta
atcatggggaacaaaacaaccattttgatagcccatagggctgcaatgatgaggcatgtt
gataacattgtagttctcaatggagggagaattgtggaagaagggtcccatgattcttta
atggcaaagaatggtctctatgtccgtttgatgcaaccgcactttggcaagggtttgcgt
caacaccgacttgtttag
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integrated database retrieval system
