Prunus mume (Japanese apricot): 103332774
Help
Entry
103332774 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103332774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103332774
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103332774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Cluap1
Motif
Other DBs
NCBI-GeneID:
103332774
NCBI-ProteinID:
XP_008233748
LinkDB
All DBs
Position
LG5:complement(21187649..21195360)
Genome browser
AA seq
868 aa
AA seq
DB search
MVRFGKQDLRTNKNQKPIKEKHKAQKQRNDVVLHSCKGKGRKRRRASTTPELEREKTDKM
RFSVDLQKAEADPGRSPTPKRDEVEWVPLQNHPVFFPATGPVRDPTAARPLRNLLAWDGA
SRLYFWDSDKLCLHRISIRLGEPDPTSVLAASPSKVLQADVNPDFAVQKISINRNGSALL
LSGSGGLCVMYLYYGRTSNKDNATICRTVTVGSQIYLSGSNIIRILQVSWHPNSDTHLGI
LSSDSVFRIFDLSSDLIQPEQEYYLQPVQPGRSRNATSICPVDFSFGSDHLWDLFSVFIL
FNDGSVYILCPIIPFGSAYKWESIVEIYNDAQTFGLKSSNSVAVSNSNLAISWLEATFPA
IADQETEGSDLYVLRAHPYALFDASLSLQGPLRKVCRDEDEEGSAFRGAECEGGAVSFLY
NLVVKDSIMVTAWSGGQLQIDALADEIQPVWNVGSPPRLRVDSNDHIRGLAMICEPTPGK
VSPVKLNQPLDSTLWLGHPPPLLRLAIVDLALPRKTKGGSLIMMFIDPLMPERIFTLHDG
GIDSIVLHYLPFTNQISGKTETMRTPSVHPVLSTCQGEISSQAPLSGFVSLSDSFGCSWI
VGVTGSRECIMLEMKTWNLLLPLQVDMEGKSLHLEEPKEKDMPDMISKELLVGPKVVLVP
QTSPNVRSVSADSIEGRSMLHDYFKLFHENYVEYAHKVHFELKHHEPLLKKIINDQHARL
GDAQQKLLQVEEKQSKLENRIDSAIQLHNVLEERLKRLRKLPGPHKKPLSRAEREFKSEL
DLFSGVELDALHSSVNALTARLRRHAESPKGNTSNQQRLISRRKDPVEESQVSQLKSSLE
KLSLVNSVNSKKVKLVESALRSRESSRS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggtccgatttggaaaacaagacctccggacaaacaaaaaccaaaagccaattaaagaa
aaacataaagctcaaaagcaacgaaacgacgtcgtcctccactcttgcaaagggaagggg
cgtaaaagaagaagagcctccacaactccagagctcgaaagagaaaagactgataaaatg
aggttcagcgtcgacctccagaaagcggaagcggacccgggccggtccccgacgcccaag
agagacgaagtggagtgggtcccgttgcagaaccatccggtcttctttcccgccaccggg
ccggtccgcgacccgaccgcagctcgaccgctcagaaacctcttggcctgggacggagcg
tctcggctttacttctgggactccgataagctctgccttcaccggatctccattcgcctt
ggcgagcccgacccgacttccgtcctcgctgcttcgccttctaaggtgctgcaagcagat
gtaaatcctgactttgcggttcaaaaaatctcgatcaataggaatggatcagcattgctt
ctttctggttcaggtggtctatgcgttatgtatctttattatgggcgtacttccaacaaa
gacaatgcaacgatttgcaggactgtgactgttggttcacaaatctacttaagtggaagc
aatatcatacgtattctgcaagtttcatggcaccctaacagtgacacccatctgggaatt
ctttcctctgattcagttttcagaatatttgatttgtcttcagatcttattcaaccagag
caagaatattatctacagcctgtgcaaccaggtagatccaggaatgcaacatcaatttgc
ccggtggacttctcatttgggagtgatcacctgtgggacttgtttagtgttttcattttg
ttcaatgatggttcagtttacatcctgtgtcctattataccatttggaagtgcttacaag
tgggaatccatagtagagatctataatgatgctcagacatttggcctgaagtcatccaac
tcagtggctgttagtaattcaaatctagctatttcttggttggaagcaacatttccagca
attgcagaccaagaaacagaaggatcagatctatatgtgttaagagctcatccttatgct
ttatttgatgcatcactctcactgcagggacccctgaggaaagtgtgtcgtgatgaggat
gaagaaggttcagcctttcggggtgcagaatgtgaaggtggagcagtcagttttctttat
aatttagtcgtcaaagactcaattatggtgactgcctggagtggtgggcaattgcaaata
gatgctctggctgatgaaatccaaccggtgtggaatgtcggcagcccacctcgccttcgt
gttgattccaacgatcatatacggggtctggcaatgatttgtgagccaaccccaggtaag
gtttcacctgtgaagcttaatcaacctcttgatagcactctttggttggggcaccctccc
cctctgttgagactggctattgtggatctggctctgcctaggaaaacaaaaggcggttct
cttattatgatgtttattgatcccctcatgccggaaagaatattcacccttcatgatgga
gggatagattcaatagtgttgcattatctcccgtttacaaatcagatcagtggcaagact
gagaccatgagaactccttcggttcatcctgttctaagcacatgccagggggaaatctcc
tcgcaagctccactttctggttttgtgtcactatcagattcattcgggtgctcatggatt
gtgggagtcactggttctcgagaatgtatcatgctggagatgaagacttggaacctgttg
cttcctcttcaagttgatatggagggcaaatctcttcacctggaagaaccaaaagagaaa
gatatgccagatatgataagcaaagagctccttgttggacctaaggtggttcttgttcct
cagacctcaccaaatgtgcgttctgtttctgctgattctattgaaggtcgatcaatgctt
catgattacttcaagctttttcatgaaaattatgtggagtatgcacataaggttcacttt
gaactgaagcatcatgaacctctcttgaagaagataattaatgaccagcatgctcgctta
ggtgatgcacaacagaagctcttgcaagtagaggagaaacaatcaaaattggagaacagg
attgatagtgcaatccagctgcacaatgttctggaggagcggttgaaacgtttgcggaaa
ttgcctgggcctcataaaaaaccattgtccagagctgagcgagagttcaagtctgagctt
gacctcttttccggagttgagttggacgcattacattcttccgtgaacgctttaactgca
aggttgagaaggcacgcagagtcgccaaagggcaatacatcaaaccaacaaaggttgata
tcaaggaggaaagatcctgtggaagaatctcaagtctcccagctgaaatcctcacttgag
aaactttcactggtcaatagtgtgaattcaaaaaaggttaagcttgttgaatctgcatta
agaagtcgggaaagcagcagatcctga
DBGET
integrated database retrieval system
