Prunus mume (Japanese apricot): 103332784
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Entry
103332784 CDS
T03196
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103332784
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
103332784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
DUF7716
Motif
Other DBs
NCBI-GeneID:
103332784
NCBI-ProteinID:
XP_008233759
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Position
LG5:21278960..21284679
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AA seq
865 aa
AA seq
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MSSPHSDSDTDSDRSHSGSEPVRHSDLSDSIFRSYLEFTGRSSATNTDLSKIQSFLTSSS
SGALSCLICLERIRPAHPTWSCTSVCFSVFHLICIQSWARQASDLSALRASTRLPISAQK
AAEVSLWNCPKCRVEYPQSQIPKTYFCFCGKLENPPSDDPWVLPHSCGEVCNRPLNHSCG
HHCLLLCHPGPCPSCPKLVKARCFCGSVQDVRRCGFKNFSCNNVCKKLLACRVHCCSEIC
HQGPCPPCPVRAVYRCQCGKREEERECCERLDFRCEEPCEKVLGCGQHKCSKGCHSEDCG
PCPFQGKRTCPCGKTVHEGLSCKASVPLCGATCSKMLSCGYHRCPERCHRGQCIVTCRTV
VIKSCRCGSLKKEVPCHQDLTCERKCQRQRDCGRHACKRRCCDGDCPPCSEVCGRKLRCK
NHKCPSPCHRGACAPCPVMVTIACLCGETHFEVPCGIEMDQKPPRCPKPCPITLLCRHGK
NRKPHKCHYGACPPCRVLCEEEYPCGHKCKLRCHGPRPPPNPEFTLKPKKKKSLHQSECT
PGSPCPPCPEHVWRSCVGQHIGVERMMVCSDKTLFSCENLCGNPLPCGNHFCTKTCHPLK
NQSLPSVQQARSEPCEKCHLPCGKEREPACSHPCPLSCHPGDCPPCKVLVKRSCHCGSMV
HVFECIYYNSLSEKEQMAARSCGGPCHRKLPYCNHLCPELCHPGQCSFPEKCSKKVTVRC
ACQSLKKEWLCHDVQAAYRNAGSDPKDISKNQFGHALIPCNSNCKSKLKVIDSELQLRRP
KIVEVKEPDTDKHGPKRKKRRERVQEVTQISTLQKIVSNVKRFLLLVTLLLLLVAVSYYG
YKVLLWLNDWMNEVEEKRQGRYPRI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaccccactcggactccgacaccgactccgaccggagccattccggatccgaa
cccgtccgccactcggacctctcggactccattttccgatcatacttggaattcaccggc
cgatcatcagccaccaacaccgacctttccaagatccaatctttcctgacctcatcgtcc
tccggcgctctttcatgcctcatatgcctggagcggatccgacccgcccacccgacctgg
tcttgcacctccgtctgtttctccgtcttccacctcatttgcatccagagttgggcgcgc
caggcctccgatttgtccgccttacgggcttccacgcgccttcccatttctgctcagaaa
gcggccgaggtatccctctggaactgtcccaaatgtagggtagagtacccccaatcccaa
attcccaagacttatttctgtttctgtggaaaactcgagaacccacctagcgatgacccg
tgggttttgccccactcgtgcggtgaggtctgcaataggcctctgaatcacagctgcggc
caccattgcttgcttctgtgccacccgggtccctgcccgtcctgtccaaagctcgtaaaa
gctcgatgcttttgtgggtctgtgcaggacgttcggcgatgtgggtttaagaatttctca
tgtaacaatgtttgtaagaagttgttggcttgtagggtccactgctgctcggagatttgc
catcaggggccctgcccgccatgcccggttcgggcagtgtaccggtgccaatgtgggaag
agagaggaggagagggagtgttgtgaaaggcttgattttaggtgtgaggagccatgtgaa
aaggttcttgggtgtgggcaacataagtgtagtaaaggctgtcattcggaggattgcgga
ccatgcccatttcaggggaagaggacatgcccctgtgggaagacagtacatgaaggattg
tcttgcaaagcctctgtgcctttgtgtggtgcaacttgtagtaagatgcttagttgtggc
taccataggtgcccggagaggtgtcatcgtggacagtgcattgtgacttgcagaacagtt
gtcatcaagtcatgccggtgcgggagcttgaagaaggaggttccttgccatcaagatttg
acatgcgaaaggaagtgccagagacaaagggattgtgggcgccatgcttgcaagcgtcgc
tgctgtgatggggactgcccaccgtgctcggaggtttgtggcagaaagcttcgatgtaag
aaccacaagtgcccatctccatgccatagaggtgcttgcgctccttgcccagtgatggtg
acgattgcatgtttatgcggcgagacacactttgaggttccttgtggtattgagatggat
caaaagcctcccagatgtcctaagccatgtcctattactcttttatgcaggcatggaaaa
aatcgcaagccacacaaatgccattatggagcttgccccccatgtagagtactttgtgaa
gaagaatacccatgtggtcacaagtgcaagctaaggtgtcatggtcctagacctcctccg
aatccagaatttacattgaaaccaaagaagaagaagtcccttcatcagagtgaatgtact
cctggttctccatgccctccttgcccagaacatgtttggaggtcatgtgttggccagcac
attggggtggagagaatgatggtctgctcagataaaacactattttcctgtgaaaactta
tgtggaaatcctctaccttgtggtaatcacttttgcaccaaaacttgtcacccgctcaag
aatcagtctttgccatcagtccagcaagcaagaagtgagccttgtgagaagtgtcatctt
ccttgcgggaaggagagggagcctgcatgttctcatccttgtcccttgtcatgccaccct
ggagactgccccccttgcaaggtgcttgtaaagcgatcatgtcactgtggttccatggtc
catgtttttgagtgcatatattataacagcttgtctgaaaaggagcaaatggcagctcgt
tcatgtggagggccctgtcatagaaagttgccttattgtaatcatctgtgcccagagctt
tgtcatcctggtcaatgctcattccctgagaagtgctctaaaaaggttactgtccgttgt
gcatgccagagcttgaaaaaggagtggttatgtcacgatgttcaggcagcctatcggaat
gctggttctgatcccaaagatatatctaagaatcaatttggacatgcacttattccttgc
aattctaattgcaaaagcaaactaaaggttattgattcagaactacagttgcgtaggcct
aaaattgtggaggtgaaggaaccagatactgataagcatggaccaaagcgaaagaaaagg
cgtgaacgggtgcaagaagtgacacaaatctcgacactgcaaaaaattgtttccaacgtg
aagcggtttcttctacttgttacacttctgttgcttttagttgcagtatcatactatggc
tacaaggttctcctctggctcaatgattggatgaatgaagttgaagagaaaagacaagga
agataccctagaatctaa
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