Prunus mume (Japanese apricot): 103332942
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Entry
103332942 CDS
T03196
Name
(RefSeq) vacuolar protein sorting-associated protein 9A
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
103332942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103332942
Membrane trafficking [BR:
pmum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103332942
Protein recycling
Other Rab GTPase associated proteins
103332942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
103332942
NCBI-ProteinID:
XP_008233931
UniProt:
A0ABM0P3P2
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All DBs
Position
LG5:complement(22262736..22266304)
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AA seq
492 aa
AA seq
DB search
MENADVFLGLQDFLERMRQPTAADFVKSIKSFIVSFSNNAPDPERDSAAVQDFFAQTEMD
FRAHPLWAGCSEEELDSAGEGLEKYVTTKLFPRVFASVPDDVKLDDQLYEKMALIQQFIR
PENLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASVASNEN
PPGADEFLPVLIYVTLKANPPQLHSNLLYIQRYRRQSRLVGETAYFFTNMLSVESFISNI
DAKSISMDETEFEKNMETARALLSGLSTDLDGQYNQSSQYAGYVHRSESMEPRHQPLNAN
KDSAQPKSSEKKSRAKNIPYGAKDNLSFSKIPSLSDLEDKGATILVNDDKASQVFREYPY
LFAHVGDLTLNDVEDLLNNYKQLVFKYVCLSKGLGVAAPSLPVSSSQTEFHQHAEMEKQQ
DHSRAIEPNDEVSNDINRNDGSLEPNDEASNDTNRKDDGSNKEPVIDLDNLQSLLSQDQV
VAPQGGKHEESS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccgatgtgttcttgggcctgcaggactttcttgaacgaatgcgtcaaccg
acggccgctgatttcgtcaagtccataaaaagtttcatagtatcgttttcgaacaatgct
cctgatccagagagggacagtgctgcggtgcaggacttctttgcccaaacggaaatggat
tttagggctcatccactttgggctggttgttcagaagaggagctcgacagtgctggcgaa
ggactggagaagtatgtcacgacaaagttatttcctcgtgtatttgcttccgttccggat
gatgtaaaacttgatgaccaactgtatgagaagatggctttaatacaacaattcattcga
ccagagaatttagatattaagcccacatttcaaaatgaaacatcatggctgcttgctcag
aaagaactgcaaaagatcaatatgtacaaggcacccagggataagcttgtgtgtatcctc
aattgttgcaaggttatcaataacttgttgctgaatgcttctgttgcttcaaatgagaat
cccccaggagctgatgaatttcttcccgtcctaatttatgttactttaaaggcaaaccct
ccacaactgcactcaaatttattgtacatacaaaggtacaggcgccaatctcgattagtt
ggtgaaacagcctattttttcacaaacatgctctctgtggagtccttcatctcaaatatt
gatgcaaaatccatttcaatggatgaaactgagtttgaaaagaacatggaaactgctcga
gcacttctttcaggactttcaactgatttggacggtcagtataatcaaagcagtcaatat
gcaggatatgtgcatagatcagaatcgatggaacccagacatcaacctttgaatgccaac
aaggattctgcacaacccaaatcttctgaaaaaaaatcccgagcgaaaaatataccctat
ggtgcaaaagataatttatccttttcgaaaattccatccctttcagatttggaggataag
ggcgcgacaatccttgtaaatgatgataaggcgagccaggtcttccgggagtatccatac
ttgtttgcgcatgttggtgatctaacactcaatgatgtagaagacctccttaataattac
aaacaacttgttttcaagtatgtttgtctttccaaagggttaggcgttgctgctccatct
cttcctgtatcaagttcacaaacagagttccaccagcatgctgaaatggaaaagcaacag
gatcactctagagctatagagcctaatgatgaagtatcaaatgatattaataggaatgat
ggttctctagagcctaatgatgaagcatcaaatgatactaataggaaggatgatggttca
aataaagagcctgttatcgatttggataatttgcaatccctattgtcacaggatcaagta
gttgcaccacagggtggtaaacacgaggagtcttcttaa
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