Prunus mume (Japanese apricot): 103333110
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Entry
103333110 CDS
T03196
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
pmum
Prunus mume (Japanese apricot)
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-GeneID:
103333110
NCBI-ProteinID:
XP_008234122
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Position
LG5:complement(22840901..22848334)
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AA seq
1118 aa
AA seq
DB search
MSTSKENIQTYGRRGLTEEQRNRISLNFRAAKALIARKRPRHDAVSPDHFPHNKICGRNG
IQTPAQLNSIQRVPLAELPINTPSPSPFSANCCKSDGGEYSSASCSGSLSINRIESSVSV
SGSDSFTTPIRQPQCSTSFDSFSAPRFLDEDDFDESILQEIDALIEQKPSVEIHHDDIES
CDGDANTASVLPVNADNQTDSTNHGLPNMPDEYSKYLLSLNERQLEAACSDISIPLMIVA
GPGSGKTSTMVGRVLMLLNEGISASNILAMTFTTAAAAEMRDRIGAVAGKATAKQLTIST
FHSFSLQLCRSHAEKLERTLEFLIYGHGQQRRAIIEAVRLLEDEKSRKNHSVAIVGEESN
SITSPHHYKDASKKWQKFVTQAKASGKTPAEYRKMGDETGGKILGNYNDILKSCNALDYH
DLISYSVKLLTDFPEVLKECQDLWKAIVIDEFQDTSAMQYSFLRILASHNHITIVGDDDQ
SIFSFNGADISGFDSFRRDFPNYKEIRLNKNYRSTRYIVEAASSVIKNNKKRCQLKNVET
DNSSGSKVIIKESHNEDAQCAFVVDKILETASNRSDAGCSYGNIAILYRRQVSGKVFQTA
LRERKIPFNIHGVAVYRKKVVRAIIAMVKTTLPDCDDGSYRQVFKALLPFEKEEKKKVIE
YIDKISAHRKCSFISAACDIFSAKISGTLKRTQLTQGRKVLLTLEMISKLVHREQSISAV
ITSVANMVPQKYLLEQRAVVDVDGGKLLNEDNDMRSVLQYLLDDISDFLSTHFVAGHGDR
EVVKEKGCVSLLKAFIDCISERENENFRSRRHDNQSSVTLTTIHQSKGLEWDIVFIIKVN
ESEIPLLHEFNGVAKENGTSIEEERRLLYVAMTRARRKLFILYVTMDSNWQMLQPSRFLK
EIPNHLREVQADISTQDLQSKNPDTSKGTTRSTADLQPNIQPSEVDSVQNDFHHSKFDEA
SAELIEFAEGNSGNGFLKRFSVDERSIVSHLFNEWAKKQAFQDPKRLLDKVGFVIDERLR
AKNYKHKDVLRLLKSCLKCDDAFHYVQYVLRWQKIPADQRAHLMREKQEHFQKLRIENSM
GSSIPTPKQISYLQNLGCTVAPTSRLHASRLIEQYKSL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtccaaagaaaacattcaaacgtacggcagacgaggactcacggaggaacaa
agaaaccgaatctctctgaatttcagagccgccaaggccctcattgctcgtaaacgccct
cgccacgacgccgtttcccctgatcactttcctcataacaaaatttgtggtagaaacgga
attcaaacaccagctcagctgaatagcatccagagagttcctcttgctgagctacctata
aacacgccatctccgtctccattctcagcgaattgctgcaagtcagacggtggcgaatat
agcagcgcttcatgttctggtagcttaagcattaaccggattgaatcaagcgtatcagta
tcaggatcagattctttcacaactccaatcaggcaaccccaatgttcaacttcatttgat
tctttctccgcacctcgatttctagacgaagatgatttcgatgagagtattttgcaagaa
attgacgctttgatcgagcagaaaccaagcgtggaaattcaccatgatgatattgagagt
tgtgatggtgatgctaataccgcttcagtgctgcctgtgaatgctgataatcagacagat
tctaccaaccatggattgccgaacatgccagatgagtattcgaagtatttgctttctctc
aatgagaggcagctcgaagcggcttgcagcgatatttcaatacctttgatgattgttgct
ggccctggaagcggaaagacttcgactatggttggccgtgttctgatgctgcttaatgag
ggcattagtgcatcgaatattctagccatgactttcactacagcagcagctgctgagatg
agagatcgaattggagctgtggctgggaaagcaactgccaaacagcttacaatcagcaca
tttcattcattttcgttgcagctttgccgatcacatgctgagaaacttgagcgcacactg
gagttcttgatatatggacatggacaacagagaagagccattattgaagctgtgcggtta
ttggaagatgaaaagagtagaaagaatcatagtgttgccatagttggcgaagagtctaac
agtatcacgtctccacatcattataaggatgcgtcaaagaaatggcagaagtttgtgact
caggcaaaagcttctggaaagactccagccgaatacagaaaaatgggtgatgagacagga
gggaaaattcttgggaactacaatgatatcttaaaatcttgtaacgctttggactaccat
gacctaattagttactctgtgaagctgctcactgattttcctgaagtgttgaaggagtgc
caggatttatggaaagctattgtgatagatgagtttcaagacaccagtgctatgcaatat
agttttctgcggattcttgcatctcataaccacataaccattgttggtgatgatgatcag
tccattttcagtttcaatggggcagacatttctggatttgattcctttcgtagagatttt
ccaaattacaaagagattagacttaataaaaactatcggtccacacgctatattgtggaa
gctgcatcttctgttataaaaaacaacaagaagcgatgccaactaaagaatgttgagact
gacaactcttctggatctaaggtaattatcaaggaaagtcacaatgaggatgcacaatgt
gcctttgttgttgacaagatcctggaaactgcatctaaccggtcagatgcagggtgctcc
tatggaaacatagcaatcctttaccggaggcaggtatcaggaaaagtcttccaaacagcc
ttgcgtgaaaggaaaataccatttaatattcatggagtggccgtttataggaagaaggta
gtcagagccattattgctatggtcaaaacaactttgcctgattgtgatgatggatcatat
cgtcaagtctttaaggctttacttccttttgagaaagaggaaaagaagaaggtaattgaa
tatatagacaaaatttcggctcatagaaaatgcagcttcatatcagctgcttgtgacatc
tttagtgcaaaaatttctggtaccttgaagaggactcagcttacccaaggacgcaaggtg
ctgttaacactagagatgatttcaaaacttgttcacagggaacaatcgatttcagctgtc
ataacttcagtggcaaacatggtaccacagaagtaccttcttgagcaacgtgcggttgtt
gatgttgatggaggaaaattgctaaatgaagacaatgacatgagatctgttcttcagtac
ctactggatgacatatctgatttcttatcaactcattttgttgcgggacatggggataga
gaagtcgtaaaagaaaaaggttgtgttagtttacttaaagctttcattgactgcatatct
gagagggagaatgaaaattttcgttcccgaagacatgacaaccagagttctgtcaccttg
actaccatccatcagtcaaaaggtttagagtgggatattgtttttataattaaggtaaat
gaatctgagattccgttgttgcatgaattcaatggcgttgcaaaagaaaatgggacctcc
attgaggaggagagacgcctgttatatgttgcaatgactcgtgctcggagaaagcttttc
attctttatgttacgatggattccaattggcagatgcttcaaccttcgcgttttctcaaa
gaaattccaaatcatcttcgagaagtccaggctgacataagtacacaagacttgcaatca
aagaatcctgacacttcaaaaggaactactcggtctacagctgatctacaaccaaacatc
caaccttctgaagtagattcagtgcaaaatgattttcaccatagtaaatttgatgaagct
tctgcagagttgatagaatttgcagagggaaatagtggcaatggtttcttaaaaagattc
agtgtggatgagagatcgattgtctcacatttatttaatgagtgggctaagaagcaagca
tttcaagatcctaagaggttgcttgacaaggttggttttgtaatagatgaacgcctacga
gccaagaactataaacacaaggatgttttgcgcttgctgaagtcttgcctgaaatgtgat
gatgcatttcattatgtgcaatatgttttgagatggcagaaaatacctgctgatcaacgt
gctcatttgatgcgggaaaaacaggaacatttccagaagttaaggatcgagaactcaatg
ggttcgtccataccaacaccgaaacagatttcttatctgcaaaatctgggatgcaccgtg
gctcctacgtcgcgcctccatgcttctcgcttgattgagcagtacaagtcattgtga
DBGET
integrated database retrieval system
