Prunus mume (Japanese apricot): 103333151
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Entry
103333151 CDS
T03196
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103333151
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103333151
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF2250
Zn_ribbon_Elf1
Baculo_LEF5_C
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
103333151
NCBI-ProteinID:
XP_008234168
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All DBs
Position
LG5:complement(23128577..23130915)
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AA seq
379 aa
AA seq
DB search
MEKELLELFEAVKKSADAATSCDGGAEESQCLDALEQLKNFPVTYQLLISTQVGKRLRHL
TKHPRKKIQTFSSALIDTWKGIVIKEANKDAKNGNLERIDSLKRASPSAESPRAEKVQKT
SAVKVEKVSKAEPVEIKKVDRGVKPSSDKAYSSETVKTERKVQNANADKTEKAASAESVK
VEKIAKEVKKPALNSSAPPKLTSMIKSNDTARDRVRGMLHEALSKVSQEADERFADYVNA
SDPIRVAVTVESVLFEHWGGSTGAQKAKYRSLIFNLKDQKNPDFRRKVLLGDIEAERLVD
MSTAEMASDQRQEENKKLEQKALFECERGGAPKATTDQFKCGRCGHRKTTYYQMQTRSAD
EPMTTYVTCVNCNNRWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctgttggagttgttcgaagcggtgaagaaatcggcggacgccgccacg
tcttgtgacggaggagccgaggaaagccaatgccttgatgccttggagcagctcaagaat
tttcccgtcacttatcaactcctcatctcaacccaagttggaaagcgtcttcgacatctc
acaaaacatcccagaaagaaaatccagacattttcttctgccctgattgatacatggaaa
gggattgttatcaaggaagcaaacaaagatgcgaaaaacggcaacttggaaagaatagac
tctctaaaacgtgcgtctccaagtgcggagagtcccagggctgagaaggttcagaagaca
tctgctgtgaaggtagagaaggtttcaaaggcggaacctgttgagattaagaaggttgat
cgaggtgttaaaccaagctctgacaaagcttatagttctgaaactgtcaagacagagaga
aaggttcaaaatgctaatgctgacaagacagagaaagccgcttcagcagagagtgttaag
gttgaaaagatagccaaagaagtgaagaaaccggcactgaactcctctgctcccccaaag
ttaacatctatgatcaagtctaatgatacagcacgggacagagtaaggggaatgctgcac
gaggctttgtccaaggtttctcaggaggctgacgaaagatttgcagattatgtgaatgca
tctgatcctattagagttgctgtgactgtggaatctgtgctctttgagcactggggtggt
tccactggtgcccagaaggcaaagtatcgatctttaatcttcaacctcaaggaccaaaag
aacccagatttccgtagaaaggttctgctcggagacatcgaggcagagaggctggtggac
atgtcaacggcggaaatggcaagcgatcagaggcaggaggagaacaaaaagcttgaacaa
aaagccttgtttgagtgtgagcgtggaggtgcgccaaaagctacaaccgatcaattcaaa
tgcggtcgatgcgggcacaggaagaccacctattaccaaatgcagaccaggagtgccgat
gaacctatgacaacatatgtaacatgtgtaaactgcaacaaccgttggaagttctgttag
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