Prunus mume (Japanese apricot): 103333255
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Entry
103333255 CDS
T03196
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103333255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103333255
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
SR proteins
103333255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103333255
NCBI-ProteinID:
XP_008234291
LinkDB
All DBs
Position
LG5:complement(23610678..23614923)
Genome browser
AA seq
405 aa
AA seq
DB search
MRPIFCGNFEYDARQNELERLFGRYGKVDRVDMKSGFAFIYMEDERDAEYAIRGLDRKEF
GRKGRRLRVEWTKVANHERGTRRPGASRRSSTNTRPSKTLFVINFDPYHTRTKDLERHFD
PYGKIVSVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRDGFSP
DRRSRDRSLDRGRDRRRSPSPYKRERGSPDYGRGPSPGPYRRERGSPDYGRGPSPYRRER
VSPDYGRGHSPSPYRRERSDHGRITSRSPRKERVSADRIRDRTRSRSPYGRERPGADNGH
APIHSPYKRDRDSPENGAIESPYKRERGSPENGAIQSPYKRDRSSPENGRGPSSSPYERE
RVSPEHGRGPSPNSVPEARGDSPNYGGPESPMQERYSSRSPQAEE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctattttttgtggaaattttgaatatgatgctcgacaaaatgaattggagcgg
cttttcggtagatatgggaaagttgacagagtggatatgaagtctgggtttgcttttatc
tatatggaagatgagagagatgctgagtatgctattcggggactggatcggaaagaattt
ggtagaaaaggacgcaggcttcgtgttgaatggacgaaggtagcaaatcatgaacgtggt
actagaagaccgggtgcttcaagaagatcttcgactaatacaagaccttcaaagaccttg
tttgttataaattttgatccgtatcacactaggaccaaggatttggagaggcactttgat
ccatatgggaaaattgtgagtgttaggatcagaagaaatttcgcatttgttcagtatgag
tcacaagaagatgctactagggcattggaagctacgaacatgagcaagctgatggatcga
gttatatcagtggagtatgcagttcgtgatgatgatgaaagaagagacggctttagtcct
gataggagaagtcgtgatagatcactagacagaggccgtgatagaagaagatccccaagt
ccctacaaaagagagaggggtagccctgattatggccgtggccctagccctggtccctac
cggagagagaggggtagtcctgattatggccgtggcccaagtccttatcgaagggagaga
gtaagtccagactatgggcgaggccacagcccaagtccctatcgaagggagagatctgat
catggccggatcactagtcgtagtccccggaaagagagggtgagtgcagaccgtatccgt
gatcgtacccgtagccgtagtccttatggaagagagaggcctggtgctgacaatggccat
gctcccatccatagtccatataagagagatagggacagtcctgaaaatggtgccatcgag
agtccatataagagagagaggggcagtcctgaaaatggcgccatccagagtccatataag
agagataggagtagtcctgaaaatggtcggggccccagcagcagtccttatgaaagagag
agggtcagccctgaacatggtcgcggtccaagccccaattctgtgcctgaagctaggggg
gacagccctaactatggtgggcctgaaagccccatgcaggagagatatagcagccgttca
ccacaagctgaggaatga
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