Prunus mume (Japanese apricot): 103333259
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Entry
103333259 CDS
T03196
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103333259
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103333259
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103333259
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
103333259
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103333259
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103333259
Prokaryotic type
103333259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
103333259
NCBI-ProteinID:
XP_008234298
UniProt:
A0ABM0P4K2
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Position
LG5:complement(23639007..23647099)
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AA seq
1092 aa
AA seq
DB search
MLGTRFRVLAKPQSVYHLISNPIKLAAPSLFRHFHIKTPLQSSPANKAAMDGGHEDPEKK
KKKEEKAREKELKKQKALEKAAKLQAQQASSSSKKSEKKKVKRSNEEEDNPEDFIDPETP
MGEKKRMSSQMAKGYSPSAVEKSWYEWWEKTGFFVADANSSKPPFVIVLPPPNVTGALHI
GHALTAAIEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKLMRESQLTRHDIGREKF
VSEVWNWKNKYGGTILQQLRRLGASLDWSRECFTMDEKRSKAVTEAFVRLHEQGLIYRDN
RLVNWDCVLRTAISEIEVDYIDIKERTFLKVPGYENPIEFGVLTSFAYPLEEDLGEIIVA
TTRVETMLGDTAIAVHPGDERYQHLHGKHAIHPFNGRRIRIICDAILVDPEFGTGAVKIT
PAHDPNDFDVGKRHNLEFINIFTDDGKINQDGGEFAGMPRFKAREAVTEALKKKGLFKEA
KANEMRLGICSRSQDVVEPMIKPQWYVKCTGMGKEALDAAIDEKKKLEIIPTQYTANWKR
WLENIRDWCVSRQLWWGHRVPAWYIVCEGDNPDNFGASYERWVVSRNEDEAQAQASKKYD
GKFQLFQDPDVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSVLETGHDILFFWVARMVM
LGITLGGDVPFTKVYLHPMVRDAHGRKMSKSLGNVIDPLEVINGISLEDLHKRLLEGNLD
PKELAVAKEGQVKDFPKGIEECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWN
AVRFAMSRLGDDYVPPSDVNPDVLPFSCQWILSVLNKVISKTVLSLELYEFSDAATSVYA
WWQYQLCDVFIEAIKPYFSGNDPKFESERVFAQATLWLCLDNGLRLLHPFMPFVTEELWQ
RLPSPRDHKRPTSIVISEYPSTVERWTNERVESEMNLVDSVVKSLRSLAKESRERRPAFV
LCRTPLDREILCSHQLEIETLANLSSLTVINENDAAPTGCVVSVVNENLSVYLKLQGSRS
IEDDLEKIRKKMEDITLQQEKLSKAMNVAGYKEKVPEKIQKANAEKLDSLEKEKLSLEEA
SQHMEAQISSEQ
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaacccgctttagggttttagcgaagccgcaatccgtttaccacctcatcagc
aacccgatcaaacttgcagcgccaagcctcttccgtcattttcacattaagactcctctt
caatcttctccggccaacaaagctgcgatggacggtggacatgaagacccagagaagaaa
aagaagaaggaagaaaaggcaagagagaaagaattgaaaaagcaaaaagcattagagaaa
gctgccaagcttcaggcgcaacaagcatccagttcttctaagaagagtgaaaagaagaag
gtaaagcgttccaatgaggaagaggataatccagaggacttcatcgacccagagactcca
atgggcgagaagaaacggatgtctagtcaaatggcgaaagggtacagcccaagtgctgta
gagaagtcgtggtatgaatggtgggagaaaacggggttctttgtggcagatgctaacagc
tccaaacctccatttgtcattgttttgccacctcccaatgtgactggtgcccttcatatt
ggacatgctcttactgctgctattgaggacactataattcgttggcggagaatgtctgga
tacaataccttgtgggtgcctggaatggaccatgccgggatagcaacacaggttgttgta
gaaaagaagctaatgcgcgaaagccagttaaccaggcatgatattggcagagagaaattt
gtgtctgaagtttggaattggaaaaataagtatggtggcaccattttacagcagctccgc
cgtctcggggcttctttggattggtcccgtgagtgctttacaatggatgagaaaagatca
aaggctgtgactgaggcttttgtaaggcttcatgagcaagggcttatctacagggataat
cgcctagtgaattgggattgtgtcttgcggacagcaatatctgaaattgaggtggactat
attgatataaaagaaaggacatttctaaaggtccctgggtacgagaaccctattgaattt
ggggttctaacttcatttgcctaccctctggaagaagatttgggtgagattattgtggcc
acaactagagtggaaactatgcttggtgatacagctattgctgtacatcctggtgatgaa
aggtatcagcatcttcatggaaagcatgccattcatcctttcaatggaagaaggattcgt
ataatatgtgatgcgattctcgttgacccagagttcgggactggtgctgtaaagattacc
ccggctcatgatccgaatgattttgatgttggaaagcgccataatcttgagtttatcaac
atctttactgatgatggaaaaataaaccaggatggtggagaatttgcagggatgccacgt
ttcaaagcccgagaggcggtgactgaagcactaaagaagaagggcctctttaaagaagct
aaggccaatgagatgcgccttggaatttgctctagaagccaagatgttgtggagcccatg
attaaaccccaatggtatgtgaaatgcactggtatgggaaaagaagcccttgatgctgct
atagatgaaaaaaagaagcttgagatcatcccgacacagtatactgctaattggaagaga
tggcttgagaacattcgtgattggtgcgtctcaaggcaactctggtggggccaccgtgtt
cctgcatggtacatagtatgtgagggtgataatccggacaattttggtgcatcatatgag
cggtgggtggtttcaagaaacgaggacgaggcccaagcacaggctagtaaaaaatatgac
gggaagtttcaattatttcaggatcctgatgtgctggatacatggttttcttctggtctc
ttccccctgtctgtgttgggctggccggatgatacagaagatctgaaggcattttatcct
acttcagttcttgaaactgggcatgacattctctttttctgggttgctcgcatggtgatg
cttggaattacattgggtggtgacgtaccttttacgaaggtatatttgcacccaatggtt
cgtgatgcacatgggcgtaaaatgtcaaagtccttggggaatgtcattgatccacttgaa
gtaataaatggtatttcccttgaagacctacacaagaggcttttggaggggaatttggac
cccaaggaattagctgttgccaaagaagggcaagtaaaggactttcctaagggtattgaa
gaatgtggagcagatgctctacgttttgctcttgtctcttacactgctcagtctgataag
ataaatctggacatccaaagggtcgtgggttatcgtcaatggtgtaataaattgtggaat
gcagtgcgatttgccatgagcaggcttggagatgattatgttccgccctcggatgtaaat
ccagatgtgcttccttttagttgccagtggattctctcagtactaaataaagtcatatcc
aaaactgttttgtcactggaattgtacgagttctcagatgcagccacttcagtgtatgct
tggtggcagtaccagttgtgcgatgtttttattgaagctatcaagccttacttctctggt
aacgatccaaagtttgagtctgaaagggtttttgcacaagccacactatggttatgtctc
gacaatgggctgcggttgcttcatccatttatgccattcgtcacagaagaactgtggcag
cggcttccatcaccaagggatcacaagaggccaacatcaattgtgatatccgaatatcca
tccactgtagagcgctggacaaatgaaagggtggaatcagagatgaaccttgtagattct
gttgtgaaatctctccgttcacttgcaaaagaaagtcgtgaaaggcggccagcttttgtg
ctttgtcggacaccgttagatagggaaatactatgcagccatcaactggagattgaaacc
ctggccaatctgtcatctttgacagtaatcaatgagaacgatgctgctccaactggatgt
gtggtgtctgttgtaaatgaaaacctttctgtctatctcaagctccaaggaagtcgttct
atagaagacgaccttgaaaagatccggaaaaagatggaagacattacattgcagcaggag
aagctatctaaggcgatgaatgtagctggttacaaagaaaaggtccctgagaagattcaa
aaagccaatgctgaaaagctcgactcgcttgagaaggaaaaattgtcgctggaagaagca
agccaacacatggaagcacagatatcttctgagcaatga
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