Prunus mume (Japanese apricot): 103333372
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Entry
103333372 CDS
T03196
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103333372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103333372
Spliceosome [BR:
pmum03041
]
Complex A
Other components
Complex A specific factors
103333372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
KH_PNO1_2nd
PHD_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103333372
NCBI-ProteinID:
XP_008234420
UniProt:
A0ABM0P4W3
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Position
LG5:complement(24293448..24298987)
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AA seq
799 aa
AA seq
DB search
METLQSNPNPPPIEALDPQPPTFSNLSSETVPSYDLKPPPPPETLVSDYKDPSPPPPSET
LASNAQNPGQIPQTGTENGNSNDGSKTLALRPDIQKPLLSENGLTNTHSGTDRDGSGGEE
ETTSRRRRRSRWDPQPESDNQSGGGESGSGPRKRKSRWADEEPKPVIQLPDFMGGIEFDP
EIQALNSRLLEISRMLSSGLPLDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKER
QEIIAQIIKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKET
GAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVD
EVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGG
HPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESATKQTSTLALAPGNSSVSNPPWVNSA
GSASSASSHPGLGSVGIKPTKEYDDTNLYIGYLPPTLDDDGLIRLFSPFGDIVMAKVIRD
RITGLSKGYGFVKYADVQMANNAIASMNGFRLDQRTIAVRVAGKPPQPAVPPGPPASTMP
TYPVSLQPVGAYPSQQFTPGGPLGNAPPTSYAGTPVPWGPPVPPPYAPYAPPPPPPGSTM
YPPPMQGAYGARYPPPPGAPSQPVTSSESQQNYPPPGVQSENSTSMQSVPTNIYGGSAMP
PNGQHSYPPSSYGYSSYYNAVPPPPPPPAPVPGSTADQSQSIGNVPWATNPPVPPPASST
EKTAYGADAEYEKFMAEMK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagactctccaatcaaaccctaaccctcctccaatcgaagccctagatcctcaaccc
cctactttctctaatctgtcttctgaaaccgtaccctcctacgatctcaaacctcctcct
cctccggaaaccctagtctcagattataaggacccatctccaccccctccctctgaaacc
ctagcttccaatgctcaaaaccccggccaaattccccagactggtactgagaatggtaat
tcaaacgacggcagcaagacgcttgctctcaggcccgatatccaaaagccgctgctgtcg
gagaatggattgaccaacacccatagtggcaccgacagagatggctccggcggggaggag
gagacgacgagcaggcgtcgccgccgcagccggtgggaccctcagcccgagtcagacaac
cagagtggtggcggcgagtcgggtagcggcccgaggaagaggaagtcgcggtgggcggat
gaggagccgaagccggtgattcagctaccagatttcatgggaggtattgagtttgatcca
gaaattcaagctttgaatagtaggcttcttgagattagtcgaatgctgtcttcgggtttg
cctttggatgatcgtcccgaaggtgcccggtctccttcaccggaacctatatatgataat
atgggaattaggattaatactagagagttccgtgcccgtgagaggttgaacaaagagaga
caggaaattattgctcagattattaagaggaaccctgcgtttaagcctccagctgattac
aggccgcctaagcttcagaagaagctttacataccaatgaaagaatatccgggttataat
tttattggtcttatcattggcccgaggggtaatacccagaagaggatggagaaagaaact
ggtgcaaaaattgtcattaggggtaaagggtcggtgaaagagggtcggctgcaacagaag
agagatttaaaacctgacccttctgagaatgaggacttgcatgttttggttgaggcggat
acgcaagacgcacttgatgctgcggctgggatggtggagaagctcttgcagcctgtggat
gaggtgttgaatgagcataagaggcaacaacttagggaacttgcggccttgaatgggaca
ataagggatgaggagtattgtaggttgtgtggtgaaccggggcaccgtcaatatgcatgt
ccatcacggacttcgacctttaagagtgatgttctttgtaagatatgtggtgatggtggg
catccaaccattgattgtccagtgaagggtacaactgggaagaaaatggacgatgagtat
cagaactttttggctgagttaggtgggacagttcctgaatctgcaactaagcagaccagt
acattggctcttgccccaggcaatagttcagtaagcaatcctccttgggttaacagtgct
gggagtgctagcagtgcatcatcacatccaggcttgggatcagttggaatcaagcctacc
aaggaatacgatgacacaaatttgtacatcggatacttgccacccactcttgatgatgat
ggtttgatccgattgttttcaccttttggtgatattgtgatggccaaagttattagggac
cggattactggattgagtaaaggttatggttttgtgaagtatgcagacgttcaaatggct
aataatgctattgcaagcatgaacggttttcgcctggatcagcgaaccattgctgtcaga
gttgctggcaagcctccacagcctgctgtgcctcctggacctccagcatcgacaatgccc
acataccctgtctctctccagcctgttggtgcctatccatcccagcaatttaccccaggt
ggtcctcttgggaatgcaccacctactagttatgcgggtactcctgttccatggggaccc
ccggttcctcctccttatgctccgtatgctcctcctcctcctcctcccggttcaaccatg
tatcctcctcccatgcagggtgcttacggtgcacgatatcctcctccccccggagcacca
tctcaaccggtgacctctagtgaatcacaacagaattatcctcctccgggagttcaatct
gaaaacagtacctctatgcaatctgtaccaactaatatttacgggggctcagcaatgcca
ccaaatggccaacattcttatcctccatcttcgtatggttactcatcttactacaatgca
gttccaccaccacctcctccccctgcccctgtacctggttcaactgcagaccaatcacag
agcattggtaatgtgccatgggccacaaatcctccggttcctcctccagcttcttctaca
gagaagacagcctatggtgcagatgcagagtatgagaagttcatggcggaaatgaaatga
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