KEGG   Prunus mume (Japanese apricot): 103333474
Entry
103333474         CDS       T03196                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103333474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103333474
   03041 Spliceosome [BR:pmum03041]
    103333474
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103333474
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103333474
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103333474
SSDB
Motif
Pfam: RRM_1 RRM_7 AF-4 FANCI_S1-cap
Other DBs
NCBI-GeneID: 103333474
NCBI-ProteinID: XP_008234537
UniProt: A0ABM0P560
LinkDB
Position
LG1:complement(15994620..15998458)
AA seq 462 aa
MAKITKTKKRRLIKTSDKTIEKKLKTQNPKQKLEEKEEREEEHPNPNQKQPQSDSDSGSV
SDSDSDSSESDVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFI
HGLGWDTTRETLVAAFESFGEIEECNLVLDKATGKAKGYGFVLFKKRRGAAKALKNPKKN
ISNRIASCQLASVGPANNNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKF
GEIETGPMGFDSQTGKCKGFALFLYKTVEGAKKALEEPFKVFEGHQLQCQKAAEGSKNKN
SAVAPPQGQMQQPTLAAVAAAQNMALFGQHPNVNPLYGGLMGNVGGGFVPGSANPGMVAR
ALNPGIMGGALNPSVIPVSQVGQVGAGVGGYNGGSHGLVNLGGGSHGLLSLGGGSHVSNP
SLLGAYGTSGSLPMLQGLQHEQPGSGRPQRASGSFAGYTSYM
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcgaagatcacaaaaacgaagaagcgcaggctcatcaaaacatccgacaaaaccatt
gagaaaaaactcaaaacccaaaaccccaagcaaaaattagaagaaaaagaagaaagagaa
gaagagcaccctaaccctaaccagaaacaaccccaatccgattccgattccggttccgtc
tcagactcagactcagactcgtccgagtccgacgtagagaacctccctgaactactccaa
gcctacaccaaggaccagctaatcgagctcatcgtcgaagcggcctccaaggactcggcc
ctcttcaaccgcattcgggacgctgcagacggcgacgtttcgcatcgaaagatcttcatc
cacggcctcggctgggacaccacgcgcgaaacccttgtcgctgccttcgaatcctttggc
gagatcgaggaatgcaatttggtgttggacaaagccacgggcaaggccaaaggctatggc
ttcgtcctcttcaaaaagcgccgtggagctgccaaggcgttgaagaaccctaaaaagaac
atcagcaatagaatcgcttcctgtcaattggcctcggtgggtccggccaacaacaacaac
acgacgacttcttcgtcgtcgtttaacgctcaatcggactcggcatcgagaaaaatatac
gtgagcagcgtgccgcatgatgttgatggtgagaaattgagaattttttttgctaaattt
ggggaaatcgaaactgggccaatgggtttcgattcgcagaccggaaaatgcaagggtttc
gctctgttcctgtacaagactgtggagggtgcgaagaaggctcttgaagaacccttcaag
gtgtttgaagggcaccaattgcaatgccagaaggcggccgaaggttccaagaacaagaac
tcagctgtggcgcccccgcaagggcaaatgcagcagccgacactggctgctgtggcagca
gcgcagaatatggctttgttcggtcagcatccgaacgttaacccattgtacggtggatta
atgggcaatgtgggtggtgggtttgttcctgggtctgctaacccgggtatggtggcccga
gcattgaacccgggtataatgggaggggcattgaacccaagtgttattccggtaagccaa
gtgggccaggtgggtgctggtgttggtgggtacaatggagggtctcatgggttggtcaat
ttaggtggagggtctcatgggttgctcagtttgggtggaggatctcatgtgagtaacccc
tcattgcttggtgcatatgggacgagtgggtctcttcctatgctccagggtctgcagcac
gagcagccgggttctggtaggcctcagagggctagtgggtcattcgctgggtatacatca
tatatgtga

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