Prunus mume (Japanese apricot): 103333503
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Entry
103333503 CDS
T03196
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103333503
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103333503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_18
RsgA_GTPase
AAA_16
MeaB
FeoB_N
nSTAND3
AAA_30
AAA_22
DO-GTPase2
AAA_24
Motif
Other DBs
NCBI-GeneID:
103333503
NCBI-ProteinID:
XP_008234572
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Position
LG5:24815045..24817563
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AA seq
410 aa
AA seq
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MAGSTSTGGSGPSNPPKILLAKPGLVTGAPVAGKFGRAGTGDEYTTSLRSRLPSSIGSLN
LLSDSWDFHIDRFLPFLTENTEFTVVGVIGPPGVGKSTIMNELYGFDATSPGMLPPFAIE
TEEGKAMARHCSMGIEPRVSAERLILLDTQPVFSPSVLAEMMRPDGSSTVPVLTTAESLS
AELAHELMGIQLGVLLTSICHILLVISEGVHDHSMWRLMSTVDLLKHGIPDPSSPTLSNS
LSSNIGPEKDSRDKAHEGGEYMATPVFVHTKLRDHDLSPHNFVQLRKALAQYVSTSSFIR
PENGNMSKSRDPDSMAPGTQSRDPDSLVPSFFVIPTKNKYDSPGDQYESYTSMLWKLRDK
VLSMNSPPFGRTVSEREWLKNSAKIWELVKNSPIIAEYSRTLQSCGMFRR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtccacctcgaccggcgggagcggcccgtcgaatcctcccaaaatcctacta
gcaaagccgggactggtgacgggggctccggtggcgggtaaattcgggcgcgccggtact
ggggatgagtatacgacgtcgcttcggtcccgtctcccttcttctatcggatccctcaac
ctcctctctgattcatgggacttccacatagaccgcttccttccgtttttgactgagaac
acggagtttacggtggtgggggtgattggtccgcctggggtgggcaagtccactattatg
aacgagctttatggcttcgatgcgacctcacctggaatgttacccccatttgctatagag
acggaagagggtaaagccatggcaaggcattgcagtatgggcattgaacccagggtttct
gctgaacgccttatacttcttgatacccagcctgtttttagtccttctgttttagctgag
atgatgagaccggatggctcgtccaccgttcctgttctaactactgctgaatctttatct
gctgagttagctcatgaacttatgggtattcagcttggtgttcttctgacctcaatctgt
cacattttgctggttatatcagagggagttcatgatcatagtatgtggcgtttgatgtcc
acggttgaccttttgaaacatggcatacctgatccatcttcaccaaccctttccaattct
ctgagctctaatatagggcctgaaaaagatagcagagataaagctcatgaaggtggagaa
tatatggctacaccagtttttgtgcacacaaaactacgggaccatgatcttagtccacat
aattttgtgcaactgaggaaggcacttgcacaatatgtcagcacctcttctttcataaga
ccagaaaatggaaatatgtccaaaagtcgtgatccagattctatggctcctggtactcaa
agtcgcgatccagattctttagtgccaagtttctttgtaatcccaacaaagaataaatat
gactccccaggagatcagtatgaaagttatacctctatgctatggaaattgcgggataag
gttttgtccatgaattctcctccttttggaagaactgtgagtgaacgtgaatggttgaag
aattctgccaagatatgggaattggtgaagaactctcctatcattgcagaatacagcaga
acacttcaaagttgtggaatgtttaggagatag
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