Prunus mume (Japanese apricot): 103333573
Help
Entry
103333573 CDS
T03196
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103333573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103333573
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
SR proteins
103333573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Transformer
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103333573
NCBI-ProteinID:
XP_008234650
UniProt:
A0ABM0P5G8
LinkDB
All DBs
Position
LG5:complement(25136576..25141786)
Genome browser
AA seq
258 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIRESEVEELFYKYGRIVDIELKIPPRPPCYSFVEFESSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGGYDRGSSGGGSGGGRFGASRHSEYRVI
VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNSDDMKYAIRKLDDTEFK
NPWTRSYIRVKLYESSPSRSRSRSRSRSRSVRRNRSKSRERSVSRSVSRSRSASPVKSSR
PRSRSGSESPRPVRSGSG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgattttctcgcacaatctacgttggcaacctaccctcagatataagagaa
tcagaggttgaagaattgttctataagtatggccgcattgtggatattgaattgaagatt
ccacctcgccctccgtgttattcgtttgttgagtttgagagttctcgtgatgcagaagat
gcaatcagagggcgtgatgggtataactttgacggttgccgtttaagggtggagcttgcc
catggtggtaggggcccatcttcaagcgatcgtcgtggtggatatgacagaggcagcagt
ggtggaggtagcggtggcggtcgctttggtgcttcacgtcattctgaatatagggttatt
gttcgtggcctcccttcttctgcttcatggcaagacttgaaggaccatatgcgaaaagct
ggtgatgtgtgttttgctgaggtttctcgtgacagcgaagggacttatggtctagttgat
tataccaattctgatgacatgaaatatgctattcggaaacttgatgatacagaatttaaa
aatccttggacaagatcttatattcgggttaaattgtacgagagcagtccgtcaaggagc
cggagtagaagtcgtagcagaagcagaagtgtgagaaggaatcggagtaagtctcgggag
cgatccgtctcaagatcagtatcaagatctaggtctgcatcacctgtcaaatcctccagg
ccaagatcaaggtcagggtcagaatctccccgtccggtgcggtcgggtagcggctga
DBGET
integrated database retrieval system
