Prunus mume (Japanese apricot): 103333626
Help
Entry
103333626 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103333626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103333626
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103333626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PWD_link
EXP1
Motif
Other DBs
NCBI-GeneID:
103333626
NCBI-ProteinID:
XP_008234726
UniProt:
A0ABM0P5P1
LinkDB
All DBs
Position
LG5:25417323..25419961
Genome browser
AA seq
591 aa
AA seq
DB search
MSNLYVQPTIQVSLTPYTLGNIQLGGASERSRFDKLVANIPLWNQIFVISCVIAVSLDPL
FFYIPFIDEDNKCLGMDKKLRVVALVLRSLSDITFIVHIICQIRQAFKTVNSKLQTTRNS
GWESKAKAVARNLSWRSVVTDVLALLPIPQVLLVNVFFKMRGSGYLDNRKILSFLLLAQY
LPRIYRIHLSSKKLTQTGLWAKGAFNFFLYILASHVLGAYWYFFSIQRETSCWHRACEDP
KRRIESCMDNFYCDDDPTTTPRNTLFRKEFCPINFPPNATPPFDFGMFLDSLQSGNTATL
DFPMKFFYSFWWGLRNLSNFGTNLTTSTYVWENFFAILISIIGLLLFLYLIGNVQTFMQL
ATTKSEETRQKIIKKEQAIEEWMVKNDLPEDMKNEIKYNIRQQWEENIDAADLENLFSIL
PWNTRKSLKRFLCMSTLRKVPMLKGMDEKVLKMICDYLKPVMYAENSVVVRMGEPLDLIL
FITEGSIWTYMPGGMQTNSVKTKGEFYGEELLKWASSSSPKLPISTQNVQCHTKVEGFVL
MSKDLTSVVSKCQLWWNTNDSHQGQGQGQPATAAGGAENSTPRIRYIMHPH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttgtatgttcagcccaccattcaagtaagcttaacaccttacactttgggc
aatattcaacttggaggagcttcagaaaggtcaagatttgataaacttgttgcaaatatt
ccattatggaaccaaatatttgtaatttcatgtgtgattgcagtgtcattggaccctttg
ttcttctacattccattcatcgatgaagataacaagtgccttggaatggacaaaaaattg
agggttgtggcacttgttttgcggtccctctcggatatcactttcatagtgcatattata
tgtcaaattcgacaagccttcaaaacggtgaactccaagctacaaacaacccgaaactcc
ggttgggaatcgaaagctaaggcagttgctcggaatctttcatggcgctctgttgttact
gacgttcttgctcttcttcccatcccacaagttcttttagtgaatgtttttttcaaaatg
agaggctctggatatttggataatagaaagattctaagtttccttcttcttgcccaatat
cttccaagaatttatcgtattcacctctcctctaagaaacttacacaaaccggactatgg
gccaaaggtgcattcaacttttttttatacattctcgctagtcatgtgctcggagcttat
tggtactttttttctattcaacgggagacatcatgctggcatcgggcatgtgaggatccc
aagcgtagaatagaatcatgcatggataatttttactgtgacgacgaccctaccacaacc
cccagaaataccttgtttcgaaaagagttttgtcctataaattttccaccaaatgctaca
ccgccatttgattttggaatgtttcttgattcacttcaatctggaaacacggcgacattg
gattttccaatgaagttcttttactcgttttggtggggactacgaaacttaagtaacttt
ggtacaaatctcacaacgagtacgtatgtgtgggaaaacttctttgcaattcttatttca
atcattggcttgctgctatttttatatctcataggaaatgtgcagacatttatgcagttg
gccactacaaaatcggaggagacaagacagaagattattaagaaagagcaagcgatagaa
gagtggatggtcaaaaatgatctccctgaagatatgaagaatgaaatcaagtataacata
agacaacaatgggaagaaaacatagatgctgctgatctggagaacctgttctctattctt
ccttggaataccaggaaatctctaaagcgttttctctgcatgagtacgctaaggaaagta
ccaatgcttaaaggcatggatgaaaaggtgttgaaaatgatttgcgactatctgaagcca
gttatgtacgccgagaacagcgtagttgttcgaatgggagaaccacttgatctgatactc
ttcattacagaaggttcgatatggacgtatatgccgggtggaatgcagaccaattcggtt
aagacaaaaggtgagttttatggagaagaacttctcaagtgggcatcatcttcatcacca
aaacttcccatctccacccaaaatgtgcaatgccataccaaggtggaaggctttgtactc
atgtctaaggacttgactagtgtcgtctccaaatgccaactctggtggaatacaaatgat
tctcatcagggacagggacagggacaacccgctacagcagcgggtggtgctgagaactcc
actccgagaatcaggtatatcatgcatcctcactag
DBGET
integrated database retrieval system
