KEGG   Prunus mume (Japanese apricot): 103333635
Entry
103333635         CDS       T03196                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103333635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103333635
Spliceosome [BR:pmum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103333635
 Complex B
    103333635
 Complex C
   U2 SnRNP specific factors
    103333635
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 103333635
NCBI-ProteinID: XP_008234736
UniProt: A0ABM0P5P8
LinkDB
Position
LG5:25478903..25483369
AA seq 511 aa
MSSTLLEVTRARHEEVERLERLIVKDFQNEPPSSKDRLYQGHRVRHMIDTISSTTERLIE
IYEDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARVVDANEEEEALL
KEEPQIEFSGEEAFGRYLDLHELYNQYINSKFGEPIEYSAYLDVFSQPQKIPRKLKLKLS
RQYSEYMENLLAYLMYFFQRTEPLQDLDRIFSKVETEFEEQWADGKVKEWENEKQENGHL
QDQLTLIDLDFYTTVEELMEVGPEKLKEALASLGLKTGGTVQQRAERLFLTKDTPLEKLD
RKHFAKGSRGSVQNGAAAASQEVDNSKEIALLEAKVKKLCDLLNEAIERTKDNIVKKQAL
TYEEIEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEYKCEI
CGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQARQGVNK
WRPDLEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctactggaggtgacacgtgcccgtcacgaggaggtggagcggctcgag
cggctgatagtgaaggacttccagaacgagccgccttccagcaaggaccgcttgtatcag
ggccaccgtgtccgccacatgatcgataccatctcctccaccaccgaaagactcattgag
atctatgaagataaagataatgcgaggaaggatgagattgccgctcttggaggccagact
gccactggcatcaacgttttcagtgcattttatgatagattgaaagagatccgtgagtat
catcgaaagcatccagctgcacgtgttgttgatgctaatgaggaagaagaggcactgctt
aaggaggaacctcaaattgagttcagcggagaggaagcttttggacggtacctcgacttg
catgaattgtacaaccagtatatcaattctaaatttggggaacctattgaatattctgct
taccttgatgttttttcacaaccacaaaagattcctcgcaaactcaaactgaagttgtca
aggcagtacagcgaatacatggaaaatctacttgcttatctgatgtattttttccagcgg
acagagcccttgcaagatcttgatagaatattttcaaaggttgaaactgaatttgaagag
caatgggcagatggcaaggtaaaagaatgggaaaatgagaagcaagaaaatgggcatctt
caagatcagcttactttgatcgatcttgatttttataccacagtggaagaactgatggaa
gtgggtcctgaaaagctaaaggaggcactagcttcattaggactgaagacaggtggcact
gttcagcagcgtgcagagaggcttttccttacaaaggacacgcctctggaaaagttggac
aggaaacattttgccaagggttcgcgaggttcagtacagaatggggctgctgcagcttca
caagaagttgacaattcaaaagaaattgctttattggaggccaaagtgaaaaaactatgc
gatttactgaatgaggctattgaacgaacgaaagacaacattgtgaagaaacaggctttg
acatatgaagaaattgaagcagaacgcgaagaggaagagacacaggccgatactgaaagt
gatgacgatgagcagcagatttacaatccactcaaattgccgatgggttgggatgggaaa
cccattccatactggctgtataagcttcatggtcttggtcaggaatacaagtgtgagata
tgtgggaattacagttactgggggcgtagagcttttgagagacatttcaaggaatggcgc
caccaacacgggatgcgttgcctcggcataccaaacaccaagaacttcaatgagatcaca
tcaattgaggaagcaaaagaactgtggaagaggatacaagcacggcaaggtgtgaataag
tggcgcccagatcttgaagaagagtatgaagacagagagggtaacatctacaataagaag
acgtatactgatctgcagcgacaggggctgatttaa

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