Prunus mume (Japanese apricot): 103333657
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Entry
103333657 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103333657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103333657
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103333657
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Motif
Pfam:
Ion_trans
cNMP_binding
CaMBD
Motif
Other DBs
NCBI-GeneID:
103333657
NCBI-ProteinID:
XP_008234764
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All DBs
Position
LG5:complement(25649754..25653044)
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AA seq
667 aa
AA seq
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MEVEIPRVQGCDLEENAEEKVPTSNANGIYCSGKSFPAVDLVADKLHKLLGHGFEWIMII
REALKSCYGVLAFGMGFKNKFVNPQELVLLQRWNKILQVLCVVSLSLDPLFCYLLIVNDE
NKCLRLDTRLGNIAILLRSVIDFFHLFRIIFQFRASITIITPSQASGTGRNESVPEPPAL
VGIYLLLWFLLDILVILPLPQVVVIFIIPRLNDSRVFNATKSLNFIVILQYVLRVLRISS
WLKKATRTSGILAETAGAKAAFNLFLYMLASHVVGAFWYLFSIERKTACWRQVCKNHAGS
EYCSLYCGDDTFGATTLLNDSCSAKTPNSTLFDFGIYSDALKSGVINSADFVQKISYCFW
WGLQNLSSLGQSLKTSTYVWEIYFSVVISISGLVLFAFLIGNMQTYLQSKTARLEEMRLK
GQEIELWMAFHSLPRKLKKRIRQYEKYKWQETRGVDVENFLHNLPRDLRRDTKRHLCSGP
LSKVPVLQNMNKRLLDAICELLKPVLYIEHSFIFRKEDPLDEMLFITRGKVLAYSSSTCG
EGANYLEKGDFYGEELLDWVLKTCPAPALSNLPISTKTVRAETKVELFALKANDLKHVVS
KFWWLFSKELRNSNSFGLQQWQPRAACVLQTAWRHHKREKLQKSPRLAQEGSHSAADHPA
VSETQHK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaaattccacgggtacagggttgcgatttagaagaaaatgctgaagaaaaa
gttcccacatctaatgctaatggcatatattgttcagggaaaagttttccagcagtggac
ttggttgcagataagttgcataaacttttaggacatggttttgaatggattatgattatc
agagaagcattgaaatcttgttatggagttttggcttttgggatgggtttcaagaataaa
tttgttaatccccaggaactagtcctgctgcaacggtggaataagatacttcaagttctg
tgtgttgtctcactttcactggatcctttgttctgttatctccttatcgtcaatgatgag
aacaagtgccttagattggatacaagattggggaacatagctattcttttgcgatccgtc
attgatttctttcatctatttcgcatcatctttcagttccgtgctagtattactattatc
actccttctcaagcatctggaactggaagaaacgaatcagttccagagcctccagcatta
gtagggatatatctgttgttgtggttcctactggacatactagtaattcttccacttcca
caggtggtagttattttcatcattccaagattaaatgattcaagggttttcaacgcaaca
aagtcattgaactttatagttatccttcaatatgtgctaagggttcttcgaatcagctca
tggttgaagaaagctacaaggacttctggcatccttgctgaaactgcaggggctaaagct
gcatttaatctctttctttatatgcttgccagtcatgttgttggagccttttggtacttg
ttctctatagaaagaaaaacagcatgttggcgacaagtctgtaaaaatcatgctggtagt
gaatactgttctttatattgtggtgatgacacatttggagccaccacacttctgaatgac
tcttgctctgcaaagacaccaaattccacactatttgattttggaatatactcagatgcc
ctgaaatctggcgtcatcaattcagcagattttgtacaaaagatatcttactgcttttgg
tggggactgcaaaatctgagctccctgggtcaaagcctcaaaacaagtacctatgtgtgg
gaaatctacttttcagttgtgatttcaatttctggcttggtattatttgcatttcttatt
ggaaatatgcagacatatttgcagtcaaaaactgcaagattggaggaaatgagattgaag
gggcaagagatagaattgtggatggctttccattcccttcctcggaagcttaagaagcgg
atacggcaatatgagaaatacaaatggcaagaaaccagaggcgtcgatgtggagaatttt
ctgcacaatcttcccagggacctcaggagggatacaaagcggcatctttgctcaggtcca
ctcagcaaagtgccagtgcttcaaaatatgaacaaacgactgctggatgcaatctgtgag
cttctgaagccagtgctttacatagagcatagcttcatatttcgaaaggaagatccactt
gatgagatgctgtttatcacgcgtgggaaggtcttggcttactccagcagtacttgcggt
gaaggcgctaattatctcgaaaagggtgatttctatggagaagaacttctggattgggtg
ctcaagacttgtccggctcccgcgttatccaacctccccatctcaaccaaaacagtccgg
gctgagacgaaagtggaattgtttgctctcaaagccaatgatttgaaacatgtggtctct
aaattctggtggcttttcagcaaggagctaaggaactctaacagctttggtttgcagcaa
tggcaaccaagggcagcttgtgttttgcaaacagcatggcgccaccataaaagagaaaag
cttcaaaagtctcccaggttggctcaagagggcagtcattctgccgctgatcaccctgct
gtctcagaaacacagcataagtag
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