Prunus mume (Japanese apricot): 103333665
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Entry
103333665 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103333665
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103333665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
103333665
NCBI-ProteinID:
XP_016650244
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All DBs
Position
LG5:complement(25698251..25705382)
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AA seq
762 aa
AA seq
DB search
MVKLASAREVRMYGPRMDRNRAEYINAGLYVFATVVLLGGFVAQLSKEPKSGLVLMLIAL
VIILVVNLHDLVAHLAMFDYSMPLMELDQQLALVEFAVPVIQALGTVLSFLGIFFLLIQA
EKGYGYSKLERHAKNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLIGSVL
FTVGAILNTREQHGLFRHGLQLLGRNWVWLGTGGSLMFLIGGLANVVKVFKMQQMSDGLR
LEKLRGGAQERLVYEREGHVPLILEDQRRRSNRPPYHDDDHRHVEPSVEPPVPPTPYKDG
LLDXIFVWCCSVGEGLVYRMASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPF
GKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVN
NKTAADVAGNVLLVTIEGDDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDA
ETATSAKTALDSRSIPRYLLPDHVGPCTLRITYSGHTDLSVKFQSHRSRDYTNPYLPVAP
SAIDGSGQISVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN
GGVQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKINNDRSRDYTIP
NIPIVNPQPSILGQQPVQMIAPAVPQYNGAQFAPTDQAVMPQPSAGWGPTVPAVPQSVPL
QMHNQPYMPPGTLPLPSQMGPGMMPSGAPPATLPPYHRGHVQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggcgtcggctcgggaggtccgaatgtacgggccccggatggaccggaac
cgagccgagtacataaacgccgggctctacgtgttcgcgacggtggtgctgcttggtggg
tttgtggctcagctgtccaaggagcccaagtcaggcctggttctgatgctcatagccttg
gtcataatcttggtggtgaatttgcatgatctggtggcccaccttgccatgttcgactac
tcgatgccgttgatggagctggaccagcagctggcgctcgtagagttcgctgttcctgtg
attcaggctctgggcaccgtcctctcattcttgggcatttttttccttctaattcaggca
gagaaagggtatggctactctaagcttgagaggcatgcgaagaacatgcttattgctggc
cctgttttgtggttgctgggttcgatccacaactcgtgccaaatctatgagagagcggat
gggcatgtccaaatcctgcaacagagcgtgcacatccccttcttgattggcagtgtgctg
ttcacagtcggtgcaattctcaacacccgagagcaacatggtttgtttcgtcatggcctg
cagctactgggtaggaattgggtgtggttggggaccggtggcagcctgatgttcctgatt
ggaggattggcaaatgtggtgaaggtgttcaagatgcaacagatgagtgatgggctgagg
cttgagaagctgaggggaggggcacaagagcggctagtttatgaaagggaaggccatgtt
cccctgatcctagaagatcaacggaggagatcaaacagaccaccttatcacgatgatgac
catcgtcatgtggaaccaagtgtagaaccaccagtacctcccaccccgtacaaagatggt
cttttggactgaatatttgtatggtgttgttctgtaggtgaagggttggtttacagaatg
gcttctgtgtccagtcagccacagttccgttacactcagccaccatcgaaggttcttcat
ttgaggaacttgccgtgggagtgcacagaggaagaactgattgaactgggaaagccattt
ggtaaagttgtgaacacaaagtgcaatgttggagcaaaccgtaatcaagcttttattgaa
tttgcggatttaaatcaagctattgcgatgatatcatattacgcctcatcttcagaacct
gctcaagtaagggggaaaacagtttacctacagtactccaataggcaagaaatagtcaac
aacaaaactgctgcggatgttgctggaaatgtactgttggtaacaattgaaggtgatgat
gcccgccttgtcagcatagatgttttacacctggtattttcagcttttgggtttgtgcac
aagataactacttttgagaagacagcaggattccaggcattggtgcaattttcagatgca
gaaactgccacttctgcaaaaactgcactggattcaagaagcatccccaggtatcttcta
cctgaccacgtgggaccgtgtactctcaggataacatattctggacacacagatttgagt
gtgaaatttcagagccaccgaagcagggactacactaatccttacctgcctgttgctcca
tcagccatagatggaagtggtcagattagcgtgggcttggatgggaaaaagctagaacct
gagagtaatgtgcttcttgcatccattgaaaacatgcagtatgctgtcaccttggacgtt
ttacacatggtcttttctgcttttgggcccgttcaaaagattgccatgtttgataagaac
ggaggggttcaggctttgattcagtatccagatgttcagacagctgtagttgccaaggaa
gccttggaagggcattgcatttacgatggagggttttgcaagcttcacatctcatattca
cgccatactgatctcagcataaagatcaacaatgatcggagcagagactatacaatccct
aacattccaattgtgaacccacaaccctcaattctagggcaacagcctgttcagatgata
gctcccgcagtgcctcagtataatggagctcaatttgctccaaccgatcaggctgtgatg
ccacaaccttctgcagggtggggaccgacggttccagcagttcctcagtctgtgcccctt
cagatgcataatcaaccttacatgccacctggaactttacctctaccttctcaaatgggc
cctggcatgatgccgagtggtgcaccgcctgcaactttgcctccctatcaccgtggtcat
gtgcaataa
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