Prunus mume (Japanese apricot): 103333667
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Entry
103333667 CDS
T03196
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103333667
Transcription machinery [BR:
pmum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103333667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Response_reg_2
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
103333667
NCBI-ProteinID:
XP_016649816
LinkDB
All DBs
Position
LG5:complement(25712718..25716240)
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AA seq
500 aa
AA seq
DB search
MGVVTVSSSASRTPLGLSTKLTSQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIEKS
ATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDA
DKEENRTSNTVVRNRTKKAKRLSLDKRVTLKWNKDEKVIASIVRKRKSRKNENEKIEELV
REYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGE
LAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVK
GLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGML
FALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGD
NRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEV
KALMKLKHPARVDYLRRYVV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacggtgtctagctcagcttcaaggactccattaggattgagcacgaaa
ttgacaagtcagagatctacgttgagaaagccattgattgttgcatttaaaacagatgaa
gcaaataagaccgccttggttgcaccccaggagaaaataccattgcctatagaaaagtct
gccactacagatgtagcttctccttgtaccttggaagtggattacaatgaagctgctgcc
aaactggaaaacttatacaagcgtagccccgagactgaagccaattcagatgtggaagat
gtagatggcttgatgagaagaggtcgcaaaaggaggaagaagacaagtgaaagtgatgct
gacaaagaagagaacagaacaagtaacactgtggttaggaacaggacaaagaaggctaaa
agattgagtcttgataaaagggttacattgaaatggaataaggatgagaaagtgattgct
tccatagttcgaaagagaaaaagtagaaagaacgaaaatgagaagattgaggagcttgta
agggagtattcggcttcaactgatctggttagtttggactggaaaaagatgaagattcct
ccagttcttacatcctcagagcatgcttggttgttcaagctaatgcaacctatgaagggt
cttcttgaagtgaaagagaatttacaaaaagatttggggagagaaccaaccaatggtgaa
ttagctgaggcgacaaatatgagtgtggttcaagtgaaaaaacatttggaagttggtcga
gctgcacgaagcaagctcatcaagcataatctccgacttgtgttatttgtcatgaacaaa
tattttcaagacttcgcaaatggcccaaaatttcaagacctttgccaggcaggagtgaag
ggacttattacagcaattgatcgctttgaaccaaaaagaagtttccggctttccacatat
ggtctgttctggatcaggcatgccatcatacgctccatgacactctcaagctttactcgt
gtctcatttggccttgaatcagttagggcggaaatccaaaaggctaagcttgggatgttg
tttgcacttaaaagaatgccaacagaggacgagataattgaaaaggttggaatttcccct
gagaggtaccatgaagtaatgagggcgtcaaaacctgttttctctcttcattcaaggcat
acaaccacacaagaggagtttataaatggtattactgatgttgatggtgtagagggtgat
aaccggcagaaacctgctcttctcaggcttgctcttgatgatgtgcttgattcactgaag
cccaaagagagcttggtgatcagacagagatacgggcttgatggtaagggcgatagaacg
ttaggggagattgctggaaacttgaatatttcaagagaaatggttcgaaagcatgaagtt
aaggctcttatgaagctgaagcatccagctcgggtagattatcttcgcagatacgtagta
taa
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