Prunus mume (Japanese apricot): 103333831
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Entry
103333831 CDS
T03196
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103333831
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103333831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
103333831
NCBI-ProteinID:
XP_008234949
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Position
LG6:complement(255583..260647)
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AA seq
475 aa
AA seq
DB search
MGYSLSRLTLESDHFDEVGSSQTSGKLLHNLEHEVAQLTKLRSAPHERLTQIGPGKRDLP
VSVVKMLAGREGNYSGRGRFSSADRCHVLSRYLPVKGPGLVDHMASRAYVSQFSADGSLF
IAAFQDSQIRIYNVDKGWKIQKNIHAKTMRWTVTDTSLSPDQHHLVYASMSPIVHMVNVG
SSQTESLANVTEIHEGLDFSSGDDGGYSFGIFSIKFSTDGHELVAGSSDDSIYVYDLEAN
KPSLRILAHTSDVNTVCFADESGHLIYSGSDDTLCKVWDRRCFKATGRPAGVLTGHLEGI
TFIDSKGDGRYFISNGKDQAIKLWDIRRMTSKATCIPGHRSSEWDYRWMDYPPQAKDIKH
PSDQSIATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSHDSGVYIYDLVSGARVATLKYH
KAPVRDCSWHPYYPMLVSSSWDGAVVRWEFPGNGEALAPAPAPFSRNSIWRRHFS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggctattcactgagtagattgaccctagaatctgaccattttgatgaagttggtagc
agtcaaacatccggcaaactcttgcataatctagagcatgaagtggcccaactcacaaag
ttaaggtcagcaccccatgagcggctcacccaaattggaccggggaagcgggacctgccc
gtttccgtggtcaagatgctggctggtcgagaaggtaattattcgggaaggggaaggttc
tcttctgcagatcgttgtcatgttctaagtagatatttgccagtgaagggtcctgggctt
gttgaccacatggccagccgggcatatgtctcacagttttcagcagatggatctcttttt
attgctgcgtttcaggatagccagattagaatatacaatgtggataaagggtggaaaata
cagaagaacattcatgcgaaaactatgcgatggaccgtcactgatacgtctctttcccca
gatcaacaccatcttgtttatgcgagtatgtcacctattgttcatatggttaatgtggga
tcatctcaaacagagtctcttgcaaatgtaacggagatccatgaaggtttggatttttcc
tctggtgatgatggagggtactcgtttggtattttctccataaaattctcgacagatgga
cacgaacttgttgctggaagtagtgatgactccatatatgtttatgatcttgaagccaat
aaaccctcccttcgaattttggcacacacgtctgatgtgaacaccgtatgttttgccgat
gaaagtgggcatcttatttattctggaagtgatgatactctctgtaaggtctgggacaga
cgttgttttaaagctacggggaggccagcgggagtcttgacgggacacctagaaggtatt
acattcattgacagcaagggagatggtcgttatttcatttcaaatggtaaagatcaggcc
attaaactttgggatatcaggagaatgacttctaaggccacctgcattccagggcatagg
agttctgaatgggattacagatggatggactacccaccccaggcaaaagatatcaaacat
ccatctgatcaatcaatagctacatatagaggtcattcagtcttgcgtacgcttattcgc
tgctacttttcccctgcatatagcactggtcaaaagtacatctacactggatcgcatgat
tctggcgtttatatatacgatttggtaagtggagcccgagtcgcgacactcaagtatcat
aaagcacctgtaagagattgtagttggcacccctattacccaatgctcgtaagctcttct
tgggatggggctgttgttagatgggagttcccagggaatggagaagcattagcacctgca
ccagcacctttcagcagaaacagcatctggaggagacatttttcttga
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