Prunus mume (Japanese apricot): 103333883
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Entry
103333883 CDS
T03196
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103333883
04120 Ubiquitin mediated proteolysis
103333883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103333883
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
103333883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
103333883
NCBI-ProteinID:
XP_008235013
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Position
LG6:complement(541293..548318)
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AA seq
738 aa
AA seq
DB search
MERKIIELDQGWDYMQKGITKLKKILEGIPEPQFNSEEYMMLYTTIYNMCTQKPPNDYSQ
QLYDKYREAFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFI
ARRSLPALNEVGLTCFRDLVYREVNANARVAVIGLIDKEREGEQIDRALLKNVIDIFVEI
GMGQMEAYEGDFEAYMLGDSGEYYSRKASNWILEDSCPDYMLKAEECLKREKERVSHYLH
SSSEQKLVEKVQHELLVVYATQLLDKEHSGCRALLRDDKVEDLSRIYRLYNKIPKGLEPV
SSVFKQHVTAEGTALVQQAEDVASNQASSGAGTQEQVLVRKIIELHDKYMAYVTDCFLNH
TLFHKALKEAFEVFCNKAVSGSSSAELLAGFCDNILKKGGSEKLSDEAIEETLEKVVKLL
AYISDKDLFAEFYRKKLARRLLFDRSANEDHEKSILTKLKQQCGGQFTSKMEGMVTDLTL
ARDNQANFEEYLHNNPDVNPGMDLTVTVLTTGYWPSYKSFDLNLPEEMVKCVEVFKGFYE
TKTKHRKLTWIYSLGTCNVNGKFEPKNIELVVSTYQAALLLLFNTADKLNYSEILTQLNL
THDDLVRLLHSLSCAKYKILIKEPNTKTISPTDSFEFNSKFTDRMRRIKIPLPPVDERKK
VIEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDIKAIKKRIEDLIT
RDYLERDKENPNMFKYLA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaaaattattgagttggatcaaggatgggactatatgcagaaggggatcacg
aagctaaagaagatcctagagggaataccggagcctcagttcaactcagaggaatatatg
atgctttacacaactatctacaacatgtgtacccaaaagcccccaaacgattattctcag
cagctttatgacaaatatcgagaggcatttgaggaatacattacttcaacggtgttgccc
tctctaagagagaagcatgatgagtttatgctgcgggagcttgtcaaaagatgggctaat
cataaagttatggttaggtggctgtcacgtttctttcattatctcgatcgctacttcatt
gcaagaaggtcacttcctgctctaaatgaagttggactcacctgcttccgtgatttggtt
tatcgggaggtcaatgctaatgccagagttgctgttattggtcttattgataaagaacgc
gagggagagcagatcgatagagcactgttgaagaatgtgattgacatatttgttgagatt
gggatgggacaaatggaagcttatgaaggggactttgaagcatacatgctaggagatagt
ggtgaatactattctcgtaaagcatcaaattggattttggaggattcttgtcctgattac
atgctgaaggcagaggaatgcttgaaaagggagaaggaaagagtttctcattaccttcat
tcaagtagtgaacagaagctggtggagaaagtgcaacatgagttgttggtggtttatgca
actcaactgcttgataaggagcattctggatgtcgtgctttgcttagagatgataaggtg
gaagatctttctaggatatatagactttacaacaaaatacctaaagggttggaacctgtt
agtagtgtattcaaacagcatgttactgctgaaggtacagccttggtccagcaggctgaa
gatgttgcaagtaaccaggcttcaagtggagctggcacacaggaacaggtccttgtcaga
aaaataattgagctgcatgacaagtatatggcatatgtcaccgattgctttttaaaccac
actctctttcacaaggctctgaaagaggcttttgaggtattttgcaataaagctgtttct
gggagttcaagtgctgaattacttgctggattctgtgataatatcctcaagaagggtggg
agtgagaagttgagtgacgaggccattgaagaaacacttgagaaggtagttaagcttctt
gcttatatcagtgacaaggatctttttgcagaattctacagaaaaaaacttgcccgtcgg
ctactttttgatcggagtgccaacgaggaccatgaaaaaagtattctgacaaagcttaag
cagcaatgtggtggacagttcacctcaaaaatggagggaatggtcacagatttgacatta
gctcgggacaatcaggccaactttgaggaatatcttcacaataaccctgacgtaaatcct
gggatggacttaacggtcactgtgcttacaactggttactggccaagttataaatcgttt
gatctgaaccttcctgaagagatggtgaagtgtgttgaagttttcaagggattctatgaa
acaaaaacgaagcacagaaaacttacatggatttactcattgggaacttgcaatgttaat
ggcaagtttgaacccaaaaacattgaactggtcgtgtcaacgtatcaggctgctctcctg
cttctcttcaatactgctgataaattgaactattcagagatattgactcagttgaacctt
actcatgacgacttggttagattgcttcattcgctgtcatgtgccaagtacaagatcctc
attaaggagccaaatacgaagactatctctccaactgacagctttgaattcaactctaag
ttcacagaccgaatgagaagaattaagattcctctcccaccagtggatgaaaggaagaag
gtaattgaagatgttgacaaagacaggcgatatgctattgatgctgcaattgtgaggatt
atgaagagtcggaaagttttgggtcatcaacaattagtcatggagtgtgttgagcagttg
ggacgtatgttcaagcctgacatcaaagcaattaagaagcgcattgaagatctcatcacc
cgtgactacctggagagggacaaggaaaaccctaacatgttcaagtatcttgcatga
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