Prunus mume (Japanese apricot): 103333918
Help
Entry
103333918 CDS
T03196
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03018
RNA degradation
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103333918
09123 Folding, sorting and degradation
03018 RNA degradation
103333918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103333918
03041 Spliceosome [BR:
pmum03041
]
103333918
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103333918
mRNA degradation factors
5'-3' decay
Lsm complex
103333918
Spliceosome [BR:
pmum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103333918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103333918
NCBI-ProteinID:
XP_008235056
LinkDB
All DBs
Position
LG6:717736..719961
Genome browser
AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGGREDGPGGRQAKGIGRGLD
DGGSKGAGGGRGRGGPGGKAGGGRGGGRGRA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgctccctctatctttgctgaagactgcccaagggcaccccatgctggttgaattgaaa
aatggggagacctacaatggccatttggtcaactgcgacacttggatgaacatccatctt
cgagaagtcatttgtacctccaaagatggagacaggttttggagaatgcctgaatgttac
atccgtgggaatacgataaagtatcttagagttcctgatgaggtgatagacaaagttcaa
gaagagaccaagagccgttcagataggaaaccacctggagtaggacgtggaagaggaaga
ggaggtagggaggatggtcctggtggacgtcaggcaaaaggcattggacgtggcctagat
gatggtggttctaagggtgctggtggaggccgaggcagaggtggaccaggtgggaaggcc
ggtggaggcagaggtggaggacgaggacgagcgtga
DBGET
integrated database retrieval system
